Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3430 ATGCATCCCGTAACCCTCTTCACTCTCTTCTCCACCTTCATCCTCACCGCCTCCGGTGCCGGTAACATCCACCTCGACTTCCCTTACTTCACCACCGCAGACACCGCCACCAACCTCACCTTCCTCGGCGATTCATCTCTAACCACCAACGGCGTCGTTTCCTTAACTCAGCCCACCACTTTCTCCACCGGTGCTATCATCTACAAACACCCCATTTCTCTCTTTGACATTTCAACAAACACCACGTCTTCATTCTCAACAACGTTCTCTTTCTCTATTACAAATTCAAATCCCACTTCCTTTGGTGATGGCATTGCTTTCTTCCTTTCCCCCAACAATCTCTCATCAACATCGTCACCAAGCCCATTTGGTCTTCCTACAAATTTTATTGCTGTTGAATTCGATACGCGATTCAACCCACATTTCAATGACCCAAATGAAAATCATATAGGTTTTGATATTGATACATTGAACTCTCTTAAAATTGTTGATCCAATTTTCAATGGGATTGATCTCAAGAGTGGTAACACTATCACTTCTTGGATTGATTACAAGACTGATCAGAATTTGCTTTCTGTTTTCTTGAGTTATTCTACTAAGAAGCCACATGATCCTATTCTTTCAGCTACCGTTGATCTTTCGGAGTATTTTTGTGATAATGAAGCTGTTTATGTTGGTTTTTCAGCTTCTGCTGAAAAAAGTACTGAGCTTCATCAAATTGAAAGATGGAGTTTTTACACTGTTGGGTTTGAGCCTGCAAGACCTAGGTTGCGTAGTCACAATGTTTCCGATAATTCTGTTGGTGTAAGTACCGGGAATGAGGTAAAAGTTCGTGGGTCGCGTTCTACTTTTTCTTCGAAGAATTCTTTTTCTTCGTCTTCGAAGAAAAAGTTTGGTTTTGGTTTTGCTGTTGCAGGTCCTGTTTTTTTCTGTGTTGTTTTTACTTTGTTGGGGTATTATTCTTTTATGAAATGGAAAGGTGTGAGAAAAGGGGTGTCGAAGAATTTTCAAACTGGGTTTGTTGCTTGTCCTAGGGAGTTTAGTTACAGAGAATTGAAATCGGCTACAAGAGAGTTTCATCCGAGCAGGATTGTTGGTCACGGTTCATTTGGAACTGTGTATAAAGCGTTCTTTATATCGTCTGGAACCATTGCTGCAGTGAAAAGATCGAGGCATTCACATGAAGGAAAGACCGAGTTTCTCTCTGAATTGAACATCATTGCTGGTTTAAGGCACAAGAATTTGGCTCAGTTGTTGGGTTGGTCTGTTGAGAAAGGTGAGTTGCTTCTTTTTTATGATTTCATGCCTAATGGAAGCTTAGACAAGATGCTTTACAAAGAACCTGAGAGAGGGAAATTGTTGACTTGGTCTATTAGGTATAATATTGTTGTTGGTTTGGCTTCTGTATTGGTTTATCTTCATCAGGAATGTGAGCAAAGAGTGGTTCATAGAGATATTAAAACTGGGAATGTTTTGCTGGATGGGAATTTCAATGCTAGGTTAGGTGATTTTGGATTGGCTAAACTCATGGATCATGATAAGAGTCCTGTTTCAACTTTAACTGCTGGAACAATGGGATACCTTGCACCTGAATATCTTCAATATGGTAAAGCTACTGATAAGACTGATGTTTTCAGCTTTGGTGTGGTTGTGCTTGAAGTGGCTTGTGGGAAAAGGCCTATTGAAAGAGAGGGTCCAAAGATGATTAATTTGGTGGATTGGGTTTGGGGGTTGTATTCTGAAGGGAAGATAATTGAGGCTGTTGATAAGAGGTTGAATGGTGAATTCGAGGAAGAGGAAATGACGAAGCTTTTGTTGTTAGGGTTGAGCTGTGCTAATCCTGATAGTGCTGCAAGGCCTACAATGAGAAGGGTTTTGCAGATTCTCAACAATGAAGCTATGCAATTTGCTGTGCCAAAAGTAAAGCCAACCTTAACTTTCTCATCTGATTTACCATTGAGTATTCATGAGATTGTTTCTGATGATGATCTTGATTATGAAGAGTTCAATACTAGCCAGTCTATGTGTGAGATTAAAATTCACTGA 2046 0.4022 MHPVTLFTLFSTFILTASGAGNIHLDFPYFTTADTATNLTFLGDSSLTTNGVVSLTQPTTFSTGAIIYKHPISLFDISTNTTSSFSTTFSFSITNSNPTSFGDGIAFFLSPNNLSSTSSPSPFGLPTNFIAVEFDTRFNPHFNDPNENHIGFDIDTLNSLKIVDPIFNGIDLKSGNTITSWIDYKTDQNLLSVFLSYSTKKPHDPILSATVDLSEYFCDNEAVYVGFSASAEKSTELHQIERWSFYTVGFEPARPRLRSHNVSDNSVGVSTGNEVKVRGSRSTFSSKNSFSSSSKKKFGFGFAVAGPVFFCVVFTLLGYYSFMKWKGVRKGVSKNFQTGFVACPREFSYRELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFLSELNIIAGLRHKNLAQLLGWSVEKGELLLFYDFMPNGSLDKMLYKEPERGKLLTWSIRYNIVVGLASVLVYLHQECEQRVVHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSFGVVVLEVACGKRPIEREGPKMINLVDWVWGLYSEGKIIEAVDKRLNGEFEEEEMTKLLLLGLSCANPDSAARPTMRRVLQILNNEAMQFAVPKVKPTLTFSSDLPLSIHEIVSDDDLDYEEFNTSQSMCEIKIH* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3430 681 CDD STKc_IRAK 365 631 - -
Mtr5g3430 681 Pfam Legume lectin domain 26 252 IPR001220 GO:0030246
Mtr5g3430 681 SMART serkin_6 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3430 681 Gene3D Phosphorylase Kinase; domain 1 326 434 - -
Mtr5g3430 681 ProSitePatterns Protein kinases ATP-binding region signature. 365 388 IPR017441 GO:0005524
Mtr5g3430 681 SUPERFAMILY Concanavalin A-like lectins/glucanases 24 247 IPR013320 -
Mtr5g3430 681 CDD lectin_legume_LecRK_Arcelin_ConA 23 249 IPR001220 GO:0030246
Mtr5g3430 681 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE VIII.1 33 649 - -
Mtr5g3430 681 SUPERFAMILY Protein kinase-like (PK-like) 343 651 IPR011009 -
Mtr5g3430 681 Gene3D Transferase(Phosphotransferase) domain 1 435 642 - -
Mtr5g3430 681 ProSitePatterns Legume lectins beta-chain signature. 130 136 IPR019825 -
Mtr5g3430 681 Gene3D - 22 251 - -
Mtr5g3430 681 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Mtr5g3430 681 Pfam Protein kinase domain 360 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3430 681 ProSiteProfiles Protein kinase domain profile. 359 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3430 681 PANTHER - 33 649 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3430 Mtr-Chr5 43154677 43157127 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3430 6 663 Receptor kinase-like Gene Family AT5G55830 56.006 0.0 718
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Mtr5g3430 Pkinase 2.8e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3430 - - adu:107496163 841.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3430 5 43154677 43157127 Mtr5g3430 5 43154677 43157127 ECH
Mtr3g1524 3 26982401 26984605 Mtr5g3430 5 43154677 43157127 PCT