Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3397 ATGGAGAATAATTTCTTATGGTTCTCCATTCTTTTGAGTCTTATAGTCTTAAAGTGTTTGATCCTCAATGTAGGAAAGAGACTCAAAAGTAAAAGCAGTGATAATAATACAACCTCAAAGCTTCCTCCAGGTCCTTGGAAGCTACCAATCATTGGAAGCATACATCACATGATTGGCTCCCTGCCCCACCACAGCATGAGAGAATTGTCCCAAAAATATGGTCCTCTCATGCACCTAAAACTTGGAGAGACTTCAGCCATAGTGGTCTCTTCAAAAGAAATTGCCAAAGAGGTGTTGAAAACAAATGAAATCACATTTCCGCAAAGACCACGCTCTCTTGGTTTAGAAATTGTTTCTTATGGTTGCACTGACATTGCTTTTTCCCCCTATGGAGAGTATTGGAGGCAGCTACGCAAAATATGCACATTGGAGCTGTTGAGTGTTAAACGTGTGAGATCATACCAATCAATTCGAGAGGAAGAGGTGTCGAAATTAATTAGATATATTTCTATTAACACTGGATCTACCATCAACCTTACAGATGAAATTTTATCTTTGACATATAGCATCACTTCAAGGGCATCTTTTGGTGATAATTGTAAGGACAATGAAGCATATATCTTGTTCATGAAGGAATCTATGTCTGTGGCTGAGAGTTTCAGTATTCATAATTTGTTTCCCTCCCAGCATTGGCTACATGTGATTAGTGGAATGGTGCATAAATTGAAGAGATTGCATAGAAGTGGTGATATGTTTCTTCAAAATATCATCAACAACAAAGTAACAAAAAAGACGAGTGAAGATGGAAGTCTTTTGTCCTATCTTTTGAATCTCAAACATGATGCTTCTAATCCTGATGGATTTCATTTGACAATCAACAACATTAAAGCCGTTATTCAGACTATGCTTATTGGTGGAAGTGAGACATCATCCTTAACTATACAATGGGCTTTCTCAGAAATGCTGAAAAACCCTAGAGTAATGAAAAAGGCTCAAGAAGAAGTTAGACAAGCTTTTGGTAGCAGAGGATATGTTGATGAAAAAGATCTTCAAGAACTGAAATATCTAAAAGCAGTTATTAAAGAAACATTAAGAGTGCATCCTCCTAATCCTGTCTTTCCTAGAGAGTGTATTGAAACTTGTGAGATAAATGGATACACAATACCAGCTGGAACACAAGTGTTTGTGAATGCATGGGCAATTGGAAGAGACCAAAAGTATTGGATTGAAGGAGAAAAGTTTTATCCAGAGAGGTTCTTGGATTCTTCAATTGATTTCAGAGGGTCTAATTTTGAGTTCATACCTTTTGGTGCAGGAAAGAGAATGTGTCCTGGAATCTCTTTTGCTGCATCTAGTATAGAACTTCCTCTTGCACAGTTGCTGTATTCTTTTGATTGGAAACTCCCCTCTGGAACCACTCATGAAAATTTTGACATGACTGAATCCTTTGGCGCTACAGTGAAAAGAAAAAGTGATCTATTTGTAATTCCAATTCCTTACAATCCTTGA 1509 0.3731 MENNFLWFSILLSLIVLKCLILNVGKRLKSKSSDNNTTSKLPPGPWKLPIIGSIHHMIGSLPHHSMRELSQKYGPLMHLKLGETSAIVVSSKEIAKEVLKTNEITFPQRPRSLGLEIVSYGCTDIAFSPYGEYWRQLRKICTLELLSVKRVRSYQSIREEEVSKLIRYISINTGSTINLTDEILSLTYSITSRASFGDNCKDNEAYILFMKESMSVAESFSIHNLFPSQHWLHVISGMVHKLKRLHRSGDMFLQNIINNKVTKKTSEDGSLLSYLLNLKHDASNPDGFHLTINNIKAVIQTMLIGGSETSSLTIQWAFSEMLKNPRVMKKAQEEVRQAFGSRGYVDEKDLQELKYLKAVIKETLRVHPPNPVFPRECIETCEINGYTIPAGTQVFVNAWAIGRDQKYWIEGEKFYPERFLDSSIDFRGSNFEFIPFGAGKRMCPGISFAASSIELPLAQLLYSFDWKLPSGTTHENFDMTESFGATVKRKSDLFVIPIPYNP* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3397 502 SUPERFAMILY Cytochrome P450 42 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 Gene3D Cytochrome P450 34 493 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 500 - -
Mtr5g3397 502 PANTHER CYTOCHROME P450 71B11-RELATED 13 500 - -
Mtr5g3397 502 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 436 445 IPR017972 GO:0005506|GO:0016705
Mtr5g3397 502 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS P450 superfamily signature 434 443 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS P450 superfamily signature 443 454 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 Pfam Cytochrome P450 42 485 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS E-class P450 group I signature 397 421 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS E-class P450 group I signature 433 443 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3397 502 PRINTS E-class P450 group I signature 443 466 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3397 Mtr-Chr5 42845148 42847806 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3397 11 497 Cytochrome P450 AT3G26310 39.798 3.67e-128 380
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3397 - K23807 gmx:100779851 582.408