Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3396 ATGGAGAATAATTTCTTATGGCTCTACATCCTTTTGAGTCTTATAGTCTTAAAGTTATTGATCCTAAATGTGGGAAAGTTATTCAAAAGTAAAAGCAGTGACAAAAATACAACCTCAAATCTTCCTCCAGGTCCTTGGAAGCTACCAATTATTGGAAGCATACATCACTTGATTGGCTCCCTACCCCACCACAGAATGAGAGAATTGTCCCAAAAATATGGCCCTCTCATGCACCTACAACTTGGAGAGACTTCAGTCATAGTGGTCTCTTCCAAAGAAATTGCCCAAGAGGTGTTGAAAACAAATGAAGTCATATTTCCACAAAGACCTCGTTCTCTTGGTCTAGAAATTGTTTCTTATGGTTGCACTGACATTGCCTTTTCACCCTATGGAGAGTATTGGAGGCAGGTACGAAAAATATGCACATTGGAGCTGTTGAGTGTTAAACGTGTGAGATCATTCCAATCAATTCGAGAGGAAGAGGTATCAAAATTAATTAGATATCTTTCTATAAACAAGGGGTCTACAATCAACTTCACAGATGAAATTTTAGCTATGACATATAACATCGCTTCAAGGGCATCTTTTGGTGATAATTGTAAGGACAAAGAAGCATATATCTTGTTCATGAAGGAATCTATGTCGGTGGCTGAGAGTTTCACCATTCATAATTTGTTCCCATCCCAGCATTGGCTACATGTGATTACTGGAATGATGCATAAATTGAAGAGATTGCATAGAAGTGGTGATATGTTTCTTCAAAATATCATCAACAACAAAGTAACAAAAAAGACGAGTGAAGATGGAAGTCTTTTGTCCTATCTTTTGAATCTCAAACATGATGGCTCTTCTAATCCGGATGGATTTCATTTGACAATCAACAACATTAAAGCCGTTATTCAGACTATGCTTATTGGTGGAAGTGAGCCAGCATCCTTAACCATACAATGGGCTTTCTCAGAAATGCTGAAAAACCCTAGAGTAATGAAAAAGGCTCAAGAAGAAGTTAGACAAGCTTTTGGTAGCAGAGGATATGTTGATGAAAAAGATCTTCAAAAACTGAAATTTCTAAAAGCAGTTATTAAAGAAACCTTAAGATTGCACCCTTCTAATCCTATCTTTCCTAGAGAGTGTATTGAAACTTGTGAGATAAATGGATACACAATACCAGCTGGAACACAAGTGTTTGTGAATTCATGGGCAATTGGAAGAGACGAAAAATATTGGATTGAAGGAGAAAAGTTTTATCCAGAGAGGTTCTTGGATTCTCCAATTAATTTCAGAGGGTCTAATTTTGAGTTCATACCTTTTGGTGCAGGAAAGAGAATGTGTCCTGGAATCTCTTTTGCTGCATCTAGTATAGAACTTCCTCTTGCACAGTTGCTGTATTCTTTTGATTGGAAACTCCCCTCTGGAACCACTCATGAAAATTTTGACATGACTGAATCCTTTGGCGCTACAGTGAAAAGAAAAAGTGATCTATTTGTAATTCCAATTCCTTACAATCCTTGA 1512 0.3717 MENNFLWLYILLSLIVLKLLILNVGKLFKSKSSDKNTTSNLPPGPWKLPIIGSIHHLIGSLPHHRMRELSQKYGPLMHLQLGETSVIVVSSKEIAQEVLKTNEVIFPQRPRSLGLEIVSYGCTDIAFSPYGEYWRQVRKICTLELLSVKRVRSFQSIREEEVSKLIRYLSINKGSTINFTDEILAMTYNIASRASFGDNCKDKEAYILFMKESMSVAESFTIHNLFPSQHWLHVITGMMHKLKRLHRSGDMFLQNIINNKVTKKTSEDGSLLSYLLNLKHDGSSNPDGFHLTINNIKAVIQTMLIGGSEPASLTIQWAFSEMLKNPRVMKKAQEEVRQAFGSRGYVDEKDLQKLKFLKAVIKETLRLHPSNPIFPRECIETCEINGYTIPAGTQVFVNSWAIGRDEKYWIEGEKFYPERFLDSPINFRGSNFEFIPFGAGKRMCPGISFAASSIELPLAQLLYSFDWKLPSGTTHENFDMTESFGATVKRKSDLFVIPIPYNP* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3396 503 PRINTS E-class P450 group I signature 70 89 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS E-class P450 group I signature 94 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS E-class P450 group I signature 186 204 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 SUPERFAMILY Cytochrome P450 42 500 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 Gene3D Cytochrome P450 34 494 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PANTHER CYTOCHROME P450 71B11-RELATED 13 501 - -
Mtr5g3396 503 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Mtr5g3396 503 PANTHER CYTOCHROME P450 FAMILY PROTEIN 13 501 - -
Mtr5g3396 503 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3396 503 Pfam Cytochrome P450 42 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3396 Mtr-Chr5 42837980 42840107 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3396 11 498 Cytochrome P450 AT3G26310 38.710 2.33e-122 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3396 - K23807 gmx:100779851 561.992