Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3395 ATGGAATGGTATTCAAGCATAATTCCCATCATTGTGACAGTTGGTTTGATATGGGCATGGAGGATACTGAATTGGTTGTGGTTAAGGCCAAAGAAGCTAGAGAAACTGTTAAGAGAACAAGGTCTTCAAGGGAATCCATATAGGATTTTGTATGGAGACATAAAGGATCTTCTTAAGATGGAAAAGGAAGCTAGGTCTAAATCCATGAATCTCACCGATGATATAATGCCACGTGTAATTCCCTACATCCAACACAATGTTAAAATTCATGGGAAGAATTCTTTTATGTGGTTTGGAACAAAACCAAGGGTGATTCTCACAGAACCTGAGCAAATCATAGATGTATTGAACAATATCTCTGACTTTCCAAAGAATAATCATAAGATTTTCAAGTTACTAGTTAGTGGTCTTGCAAGTCTTGAGGGAGAAAAGTGGAGCAAGCATAGAAGGCTAATCAACCCCGCTTTCCATTCAGAAAAATTGAAGGTTATGACACCAACTTTCTTCACAAGTTGCAACGATTTAATTAGAAAATGGGAGGAAATGTTGTCTCCAGATGGATCATGTGAAATAGATATATGGCCTTCCCTTCAGAATTTGGCGAGTGATGTTATTTCTCGAACAACATTCGGAAGTAGTTATGAAGAAGGAAGAAGAATATTTCAACTTCAAATTGAGCAAGCTGAACTTATGACAAAAGTTCAAATGAATTTTTACATTCCTCTATGGAGGTTTGTACCTACTATGGTCAATAGGAGGATTAATGAAATTGGGAAAGATATAAAATCTTCACTTAAGGATATGATCAACAAAAGGGTGAAAATATTAAAGGAAGGTGGAGAAAATAAGAATGATTTATTAGGTATTCTTATAGAGACAAACCACAAGGAAATTAAAGAACATGGAAACAACGTGAATGTGGGAATGAATATTGAAGATGTAATTCAGGAATGCAAGTTGTTCTACTTTGCAGGGCAAGAGACTACTTCAACTTTACTTGTTTGGACAATGGTATTATTGAGTAGGTACCCTGAGTGGCAAGCAAGGGCAAGGGAGGAAGTATTACAAATCTTTGGCAACAAAAAACCTAATTTTGATGGGCTAAATAACTTGAAGATTGTTACCATGATTTTGTATGAGGTTATGAGATTATATCCTCCCATAATTGAGCTTTCGCGAAACGTTGAAAAAAATGTGAAACTTGGAAACCTAACATTATCTGCTGGAGTGGAGGTTTTCATGCCAATTATATTGTTGCACCATGATTGTGAATTATGGGGTGATGATGCTAAAATGTTCAATCCTGAAAGATTTTCTGGAGGAATTTCCAAAGCAACGAACGGTAGAGTTTCATTTTTTCCATTTGGATGGGGTCCTAGGATCTGCATTGGGCAAAACTTTTCTCTATTGGAAGCAAAGATGGCAATGACATTGATTTTACAGCATTTCTCATTTCAACTTTCTCCAGCCTATGCTCATGCTCCAGCCACAGTAATTGCTCTTAAGCCACAATACGGTGCTCATATTATTCTTCGTAAACTGGAAACATAA 1551 0.3649 MEWYSSIIPIIVTVGLIWAWRILNWLWLRPKKLEKLLREQGLQGNPYRILYGDIKDLLKMEKEARSKSMNLTDDIMPRVIPYIQHNVKIHGKNSFMWFGTKPRVILTEPEQIIDVLNNISDFPKNNHKIFKLLVSGLASLEGEKWSKHRRLINPAFHSEKLKVMTPTFFTSCNDLIRKWEEMLSPDGSCEIDIWPSLQNLASDVISRTTFGSSYEEGRRIFQLQIEQAELMTKVQMNFYIPLWRFVPTMVNRRINEIGKDIKSSLKDMINKRVKILKEGGENKNDLLGILIETNHKEIKEHGNNVNVGMNIEDVIQECKLFYFAGQETTSTLLVWTMVLLSRYPEWQARAREEVLQIFGNKKPNFDGLNNLKIVTMILYEVMRLYPPIIELSRNVEKNVKLGNLTLSAGVEVFMPIILLHHDCELWGDDAKMFNPERFSGGISKATNGRVSFFPFGWGPRICIGQNFSLLEAKMAMTLILQHFSFQLSPAYAHAPATVIALKPQYGAHIILRKLET* 517
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3395 516 PRINTS P450 superfamily signature 324 341 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PRINTS P450 superfamily signature 453 462 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PRINTS P450 superfamily signature 462 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 Gene3D Cytochrome P450 68 514 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 SUPERFAMILY Cytochrome P450 77 512 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 455 464 IPR017972 GO:0005506|GO:0016705
Mtr5g3395 516 PANTHER CYTOCHROME P450-LIKE 10 511 - -
Mtr5g3395 516 PRINTS E-class P450 group I signature 87 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PRINTS E-class P450 group I signature 200 218 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PRINTS E-class P450 group I signature 313 330 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PRINTS E-class P450 group I signature 333 359 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PRINTS E-class P450 group I signature 452 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PRINTS E-class P450 group I signature 462 485 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 Pfam Cytochrome P450 85 489 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3395 516 PANTHER CYTOCHROME P450 FAMILY MEMBER 10 511 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3395 Mtr-Chr5 42818964 42824395 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3395 5 514 Cytochrome P450 AT3G14690 53.320 0.0 591
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3395 - K23809 mtr:MTR_2g055470 747.273