Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3371 ATGAAGGTTCGATATGCTCCACATCTTCCACTTGTGTTGCGTGGCCTGAATTGCACGTTTCGTGGAGGATTGAAAACTGGCATTGTTGGTAGAACAGGTAGTGGAAAATCAACTCTTATACAAACACTTTTCCGACTCGTTGAACCTACTGCCGGGGAAGTTATCATCGACAGAATCAACATATCTACAATTGGACTGCACGATTTGAGGTCTAGACTAAGCATTGTTCCGCAGGATCCAACCATGTTAGAGGGGACTGTGAGAAGTAATCTGGACCCGCTGGAAGAGTACACTGATGAACAAATATGGGAGGCTTTGGATAAGTGTCAACTGGGAGAGGAAGTTCGAAAGAAAGAAGGAAAGCTTGACTCTTCAGTTAGTGAGAATGGTGAGAACTGGAGCATGGGTCAGAGACAGTTGGTTTGCCTAGGTAGGGTTCTGCTTAAGAAGAGCAAGATTTTGGTGCTTGACGAAGCAACTGCTTCAGTTGATACAGCTACAGATAATTTGATTCAGCAAACTCTTAGGCAACATTTCATGGATTCTACTGTCATTACCATTGCACATCGAATAACTTCTGTTCTTGACAGTGATTTGGTTCTAACTTCTGTTATTCTTCGTTGA 624 0.4295 MKVRYAPHLPLVLRGLNCTFRGGLKTGIVGRTGSGKSTLIQTLFRLVEPTAGEVIIDRINISTIGLHDLRSRLSIVPQDPTMLEGTVRSNLDPLEEYTDEQIWEALDKCQLGEEVRKKEGKLDSSVSENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRQHFMDSTVITIAHRITSVLDSDLVLTSVILR* 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3371 207 PANTHER ABC TRANSPORTER C FAMILY MEMBER 7 2 201 - -
Mtr5g3371 207 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 3 207 IPR003439 GO:0005524
Mtr5g3371 207 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 201 - -
Mtr5g3371 207 Pfam ABC transporter 13 161 IPR003439 GO:0005524
Mtr5g3371 207 CDD ABCC_MRP_domain2 3 201 - -
Mtr5g3371 207 SMART AAA_5 22 206 IPR003593 -
Mtr5g3371 207 Gene3D - 1 204 IPR027417 -
Mtr5g3371 207 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 3 201 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3371 Mtr-Chr5 42629815 42634934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3371 12 200 Calmodulin-binding Proteins AT2G36910 30.526 1.81e-27 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3371 - K05666 mtr:MTR_5g094820 394.815