Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3362 ATGGCTACTACATTTTTATCACTTTACCCTTACAATCCTTTCAACATTCTTCCATTTCCTTCCTCTAATCATGCTTCTGCGTCTTGTTCTTCTTCTTCTTCTTCATTTCTCAAACGAAGAAAATTCACTGTTCTTTCTGCTCATTCCAATCCCAAAATTCTCAAAACCAACAGAAAATCAACCTATGGAAAATTCCTCTCCCCGTATGACTCTGATGATGAAATTGAAGAAATGGACTTTGAAGACGACGAAGATGAAGATGAAGATGAAGATGAGGATGATGATGATGATGATGATGATGATGATGAAGATGATGATGATGACGGATTTGCTGAGCCTACTGATCTTAATGCCAAAGACAAGAGATTGAAGTCAAAGACAGTTCCAGATAGACAACAAGAAAAGGAGAAGGAAAAGGGTGTGAGATCTCTTAACAATGGACAAAGCAAAAGATTGCCCAAAAGTCAGAGAATAGCATCCTTACAAGAAAATAACAGTGCAAAGTTTCGTAGAAATTCGATGGAGAAAAAATATCCGGAGTTGTCTGAAGAGATTCTTTTGGATGAGAAATGGTTACCACTTCTTGATTACTTAAGCACCTTTGGAATTAAGGAATCACAGTTCATCCAAATTTATGAGAGGCACATGTCGTCATTTCAAATTAATGTATGTTCTGCACAGGAAAGGATAGATTACTTAATGAGTCTTGGGGTTAAACATAAAGATATAAGAAGAATCCTTTTGAGGCAACCACAAATTCTAGAATACACGGTGGAGAACAATTTGAAGACTCACGTTGCATTCTTAATGGGCTTGGGCGTACCTAGTACCAAAATAGGGCAAATTATTGCTTCTACTCCATCCCTTTTTTCTTACAGTGTTGAGAAATCTTTAAAACCAACGGTAAGATATTTAATTGAGGAAGTTGGCATCAAGGAAAAAGATTTGGGTAAAGTCATTCAACTGAGTCCTCAAATTCTTGTCCAACGTATTGACATTTCATGGAATACTCGATTGATGTTTCTTAACAAAGAGTTGGATGCACCCAAAGAGAGCATTGTGAAGATGGTGACGAAACACCCTCAGCTTTTGCATTACAGTATTGATGATGGATTGCTTCCAAGAATAAATTTCCTAAGGAGCATAGGAATGAAAAATGCGGACATCTTGAAAATCTTGACTAGCCTTACACAGGTGCTATCTCTGTCCTTGGAAGCTAATCTAAAGCCGAAGTATTTGTACTTGGTAAATGAACTTCACAATGAGGTGCAAACCTTGACCAAATACCCGATGTACCTTAGCTTGTCTTTGGACCAGAGAATTCGTCCTCGTCATAAGTTCTTGGTTTCCCTAAAGAAAGCTCCAAAAGGACCATTTCCTCTTGGATCTTTAGTTCCAACTGATGAATCCTTTTGTCAACGGTGGGCTGGAACTACTCTTGATGAATATGCTGCATTTCGACAGAGATTATTACTCAAAAAATTAGCTGAGAAATATGACAGAAAAATGTGA 1512 0.3757 MATTFLSLYPYNPFNILPFPSSNHASASCSSSSSSFLKRRKFTVLSAHSNPKILKTNRKSTYGKFLSPYDSDDEIEEMDFEDDEDEDEDEDEDDDDDDDDDDEDDDDDGFAEPTDLNAKDKRLKSKTVPDRQQEKEKEKGVRSLNNGQSKRLPKSQRIASLQENNSAKFRRNSMEKKYPELSEEILLDEKWLPLLDYLSTFGIKESQFIQIYERHMSSFQINVCSAQERIDYLMSLGVKHKDIRRILLRQPQILEYTVENNLKTHVAFLMGLGVPSTKIGQIIASTPSLFSYSVEKSLKPTVRYLIEEVGIKEKDLGKVIQLSPQILVQRIDISWNTRLMFLNKELDAPKESIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNADILKILTSLTQVLSLSLEANLKPKYLYLVNELHNEVQTLTKYPMYLSLSLDQRIRPRHKFLVSLKKAPKGPFPLGSLVPTDESFCQRWAGTTLDEYAAFRQRLLLKKLAEKYDRKM* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3362 503 MobiDBLite consensus disorder prediction 63 166 - -
Mtr5g3362 503 MobiDBLite consensus disorder prediction 112 144 - -
Mtr5g3362 503 SMART mt_12 244 275 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 SMART mt_12 390 422 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 SMART mt_12 423 454 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 SMART mt_12 209 239 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 SMART mt_12 354 385 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 SMART mt_12 280 312 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 SMART mt_12 317 349 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 SMART mt_12 172 204 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 PANTHER CGI-12 PROTEIN-RELATED 33 495 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 MobiDBLite consensus disorder prediction 72 111 - -
Mtr5g3362 503 MobiDBLite consensus disorder prediction 145 166 - -
Mtr5g3362 503 Pfam mTERF 255 451 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 Pfam mTERF 194 269 IPR003690 GO:0003690|GO:0006355
Mtr5g3362 503 Gene3D Transcription termination factor 3, mitochondrial 260 490 IPR038538 -
Mtr5g3362 503 Gene3D Transcription termination factor 3, mitochondrial 154 259 IPR038538 -
Mtr5g3362 503 PANTHER TRANSCRIPTION TERMINATION FACTOR MTERF9, CHLOROPLASTIC 33 495 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Mtr5g3362 mTERF 5.9e-44 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3362 K15032 - gmx:102660933 650.588
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3362 5 42533277 42536598 Mtr5g3362 5 42533277 42536598 ECH