Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3355 ATGAAAAACCTTCTGTTTGACATGTTACTCCCAAGAGAAAGTAGGGAGAGTTGCCAAATCAATGAGTATGATATTCCAGCTAAGACTAGGGTTATTGTCAATGCTTGGGCGATTGGAAGAGATCCAAAGTATTGGGTTGAAGCTGAGAGTTTTAAACCCGAGAGGTTTGTTAATAGCTCAATTGATTTCAAAGGCACAGACTTTGAATACATACCATTTGGTGCTGGAAGGAGGATGTGTCCGGGCATTGCATTTGCCTTATCAAATGTTGAACTTCCTCTTGCTGAATTACTTTATAACTTTGATTGGAAGCTTCCCAACGGAATGAGCCATCAAGAACTTGATATGACCGAGTCATTTGGGCTTAGTGTAGGAAGAAAACACGACCTATGTTTGATTCCTATTAATCATCATCCGTAA 420 0.3976 MKNLLFDMLLPRESRESCQINEYDIPAKTRVIVNAWAIGRDPKYWVEAESFKPERFVNSSIDFKGTDFEYIPFGAGRRMCPGIAFALSNVELPLAELLYNFDWKLPNGMSHQELDMTESFGLSVGRKHDLCLIPINHHP* 140
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3355 139 Gene3D Cytochrome P450 6 128 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3355 139 PANTHER CYTOCHROME P450 71B11-RELATED 7 137 - -
Mtr5g3355 139 Pfam Cytochrome P450 7 121 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3355 139 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 73 82 IPR017972 GO:0005506|GO:0016705
Mtr5g3355 139 SUPERFAMILY Cytochrome P450 8 133 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3355 139 PANTHER CYTOCHROME P450 71D10 7 137 - -
Mtr5g3355 139 PRINTS E-class P450 group I signature 34 58 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3355 139 PRINTS E-class P450 group I signature 70 80 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3355 139 PRINTS E-class P450 group I signature 80 103 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3355 Mtr-Chr5 42493650 42494069 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3355 8 134 Cytochrome P450 AT3G26330 55.906 1.85e-46 155
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3355 - - mtr:MTR_5g094510 224.557