Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3353 ATGCAAGCCTTATGGTTGTCCTTGAAAGACAATGTCAAATGTGGAAACAAGCTCACTGATGTAATAAGGCAGCCACCAAAATTTGGCAAAGGGAGTAGCTATGTTCTACAAAAGGAGAATAAAATGAACAAAGAAGATGAAGAAGATAATACCCCTCTCATGGAAACTCCAGCCAGACTAGTTTTTTCCAAGCCAAACAAGTCACAGGCTCGGCTTTTCGAGCTTGGTATCGGAGACCCATCAAGAAAAATTGTTGAGATGATATTTCAGAAAGCATGGATGAACACCTCAAAGCCACTGAGGAAAGTTAGAACAGTTCTAAGGGTGAGATACTCAGAAGAAGTTCTTGAAAGATTTGAGAAGTATAGAGAAAAAGTGAAGGAACAGTATCCAAGGCATCCAAGAAGCACAGTAGATGGAAATGAATTGTTGAGATTCTATGTCACTACAATGAGATGTTTCCAAGGGAAACCTATGAAGAAAGTTCATGATCTTTGTAAAGATCCATCGTGTCGATTTTGTCAAGTAATTCAATTCAATTTTGACGCGGAACACGCGGAGATTCTGTTGAATACATGTGAGAAAGATTTGAGTAACAGAAAAAGTGTCAATGCAAGAGTGAAGAATGTGAAAAGAGTTTTAATAGTTTGCAGGATAATTGCTGGAACTGCAGTGAATGAAGTTGATGGTAACTATGAAGAATGTTCTGAGTGTGACTCAACTAGGCTAGGAGAAATGCAATTTAGCTTAGAAAGATTTGTAGTGAAAAATCCTAGTTCTATTCTCCCTTGTTTTGTCATAATTTTCAACTGA 813 0.3764 MQALWLSLKDNVKCGNKLTDVIRQPPKFGKGSSYVLQKENKMNKEDEEDNTPLMETPARLVFSKPNKSQARLFELGIGDPSRKIVEMIFQKAWMNTSKPLRKVRTVLRVRYSEEVLERFEKYREKVKEQYPRHPRSTVDGNELLRFYVTTMRCFQGKPMKKVHDLCKDPSCRFCQVIQFNFDAEHAEILLNTCEKDLSNRKSVNARVKNVKRVLIVCRIIAGTAVNEVDGNYEECSECDSTRLGEMQFSLERFVVKNPSSILPCFVIIFN* 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3353 270 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 2 270 - -
Mtr5g3353 270 SUPERFAMILY ADP-ribosylation 72 270 - -
Mtr5g3353 270 PANTHER NUCLEIC ACID-BINDING PROTEIN 2 270 - -
Mtr5g3353 270 Gene3D - 70 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3353 Mtr-Chr5 42464078 42465733 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3353 68 268 C2H2 Transcription Factor Family AT5G54630 34.685 1.97e-26 105
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3353 - - mtr:MTR_5g094440 541.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3353 5 42464078 42465733 Mtr5g3353 5 42464078 42465733 ECH