Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3349 ATGCAAGACACAATAGATTTTACAATGTTTCACTTTTCTATTCTAATTTCTTTCTTTATGATCATGTTTTGTTCAGGAGGTGAGTTATTATCATCAGAGTCTCATTCTTTCTTCAGTTTCCTTAAAGCTATTGATTCCAATAATGTACTCAACATTAGCAAGATATCACATCCATGCTTGATCAATGGTGTAAGATGCAACTCAAATGCTACCAATATTTTAGAGATAAGGCTTGATAACATGAACCTTAGTGGTATATTTGATGCAGATTCATTATGTAGACTCCAAAAGCTTAAAGTGGTTAGTTTAGCTAATAATAATATCAAAGGGACTATTTCATTCTCAATTTTGCATTGTACAAGATTGGTATATTTAAATGTATCCAATAATCAATTGAGTGGTAGGTTTCCAAATAAGGCTTTAACAAGATTGAAATATCTTACGAACTTAGATGTATCTATGAATAATTTTTCTACTAGTTACATGGCTCCAATTAGTATTAAGTTAGAGAGCAATACAATACAACCAACACCTAGTCCTTTAACTAACAAAACACCTAAAAATGCAACTTCCGAAATTGAAATCATGGTAGGGTTGGTTTTGGGAATTGGATTACTTTTGTCATCACTATACTTCATGATAAAGAAATCATCCAAATTAATGGGAGAGATTGAGGTAAAGAAAAACAATTTAGATTCTCCTATGAAAAAGGCTACAAGTGAGGGGAGATTAAAAGGAGGAGATAATAATAACTCAGAGCTTGTATTCTTTGTTGAAGATCATGAGAGGTTCAAACTGGAGGATCTACTAAGAGCTACAGCTGATTTGAGAAGTGAAAACTTTTGGAGTAGTCTTTTCAAGGTAAAATTTGAGAATAATGTTGAATATGCAGTCAAAAGATTGAAGAATTTGCAGGTATCTTGTGATGAATTTCGCGAAATATTGAAGCAGATAAGTAAAGTAAAACATCAAAATATTCTCTCACTTGTTGGTTATCGTTCTACAAAGGAAGAAAAACTTATCATTTACAAATATCAAAGCAATGGAAGTGTGCTCAATCTTTTAAACGATTATATAGCACGAAGAAAAGATTTCCCATGGAAACTTCGTCTCAATATAGCATGTGGAATTGCAAGGGGTTTGGCCTTCATTTACAAGAAGTTAGAAGAAGGGGAGGTCAATAGTATTCCTCATGGAAACCTCAAGCTATCAAATATCCTTCTTGATGACAAAAACGAAGCCCTAATAAGTGAACATGGTTTATCAAAATTCTTTGAACCAGATAGAGGTACCTTCTTTTCCTCTCATGGATACACAGCTCCTGAAAAGAGTTTAACAGAAAAAGGCGATGTTTATAGCTTCGGAGTGATTCTACTAGAACTACTAACAGGACAAAGCATAGAAGTTAGTAGAATAGACCTTGTTAGATGGGTGAGGTCAATGGTGAGAGAGGAATGGACAGGAGAGGTATTTGATAAGGAAGTTAGGGAAAATGATCATCAAGGTGCATTTTCATTGTTGAACATAGCTCTTATGTGTGTGTCACGTTCACAAGAAAATAGGCCAAATTTTGGAGAAATTTTGGAGACAATAGAGGGAGTTATGAATGCACATGACCAACAACAGATGGAACTTTCTGCTTCAAAATGTTGTTCTAATGGATCCAATCAAGAATGTTGTTCACTTCATCAAATCATACCTGATACATGGGATTCTCCTGGATCAAATTATTGA 1734 0.3391 MQDTIDFTMFHFSILISFFMIMFCSGGELLSSESHSFFSFLKAIDSNNVLNISKISHPCLINGVRCNSNATNILEIRLDNMNLSGIFDADSLCRLQKLKVVSLANNNIKGTISFSILHCTRLVYLNVSNNQLSGRFPNKALTRLKYLTNLDVSMNNFSTSYMAPISIKLESNTIQPTPSPLTNKTPKNATSEIEIMVGLVLGIGLLLSSLYFMIKKSSKLMGEIEVKKNNLDSPMKKATSEGRLKGGDNNNSELVFFVEDHERFKLEDLLRATADLRSENFWSSLFKVKFENNVEYAVKRLKNLQVSCDEFREILKQISKVKHQNILSLVGYRSTKEEKLIIYKYQSNGSVLNLLNDYIARRKDFPWKLRLNIACGIARGLAFIYKKLEEGEVNSIPHGNLKLSNILLDDKNEALISEHGLSKFFEPDRGTFFSSHGYTAPEKSLTEKGDVYSFGVILLELLTGQSIEVSRIDLVRWVRSMVREEWTGEVFDKEVRENDHQGAFSLLNIALMCVSRSQENRPNFGEILETIEGVMNAHDQQQMELSASKCCSNGSNQECCSLHQIIPDTWDSPGSNY* 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3349 577 SUPERFAMILY Protein kinase-like (PK-like) 283 531 IPR011009 -
Mtr5g3349 577 Pfam Protein tyrosine and serine/threonine kinase 289 530 IPR001245 GO:0004672|GO:0006468
Mtr5g3349 577 SUPERFAMILY L domain-like 56 164 - -
Mtr5g3349 577 Gene3D Ribonuclease Inhibitor 33 194 IPR032675 -
Mtr5g3349 577 ProSiteProfiles Protein kinase domain profile. 270 535 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3349 577 Gene3D Phosphorylase Kinase; domain 1 237 345 - -
Mtr5g3349 577 PANTHER TYROSINE KINASE FAMILY PROTEIN 13 570 - -
Mtr5g3349 577 Gene3D Transferase(Phosphotransferase) domain 1 347 557 - -
Mtr5g3349 577 PANTHER OS05G0588300 PROTEIN 13 570 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3349 Mtr-Chr5 42427125 42429844 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3349 72 534 Receptor kinase-like Gene Family AT5G53320 33.403 4.86e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Mtr5g3349 PK_Tyr_Ser-Thr 1.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3349 - - gmx:100807491 730.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3349 5 42427125 42429844 Mtr5g3349 5 42427125 42429844 ECH