Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3337 ATGGGTTTCGTTGTCACCTCGCTAATCTTCCTACTCATCGGAATCATCGCATGCCTATCTACAAGAATTTGCTTCAACAAAGGACCTTCTGCTAATCTATTTCACCTTACTTTGGTCCTTACATCAACAATATGCTGCTGGATGATGTGGGCGATTGTATATCTGGCACAGATGAACCCGCTCATAGTTCCCATCTTGAGTGATGGCGAATAA 213 0.4319 MGFVVTSLIFLLIGIIACLSTRICFNKGPSANLFHLTLVLTSTICCWMMWAIVYLAQMNPLIVPILSDGE* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3337 70 PANTHER VACUOLAR ATP SYNTHASE SUBUNIT H 1 70 IPR008389 GO:0033179|GO:0046961|GO:1902600
Mtr5g3337 70 Pfam ATP synthase subunit H 3 67 IPR008389 GO:0033179|GO:0046961|GO:1902600
Mtr5g3337 70 PANTHER V-TYPE PROTON ATPASE SUBUNIT E2 1 70 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3337 Mtr-Chr5 42300719 42303889 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3337 1 70 Primary Pumps ATPases(2) AT4G26710 78.571 1.67e-37 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3337 K02153 - han:110942100 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3337 5 42300719 42303889 Mtr5g3337 5 42300719 42303889 ECH