Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3335 ATGTCAATGGCTTCTTCAGATGCATGGGTGAAGGAATATAATGAAGCAACGAAACTTGCCGAGGATATCAGCAGCATGGTTTCTGAGTGGAGTTCCTGTCCTGCATCTGGACCGGAAGCCCAGCGGCAATCATCTTCTACAAGAAAGAAGATTACAATATTAGGGACTAGGCTTGATAGCTTGCAATCCCTTTTATCAAAGCTTCCTGGAAAGCAGCCTCTATCCGAGAAGGAGGAGAATCGTCGAATGGACATGCTTGCAAATTTGAGATCAAAAGTTAACCAAATGGCTTCTACTCTGAACATGTCAAATTTTGCAAACAAGGATAGGTTGGTTGGTCCAGAAGTAAAACCAGATGTAATGAGTAGAACTGTTGGCCTGGACAACAACGGACTTGTTGGATTTCAACGACAAATTATGAAAGGTTACTTAAGTAGATTGTTTGACAATATATTACTTGGAATCTGTTCTTTCAATCTGATAGCACTCTTTTTTTTTTTTTTGTTTGACAAACTTATTAATTATACACACTAA 534 0.3895 MSMASSDAWVKEYNEATKLAEDISSMVSEWSSCPASGPEAQRQSSSTRKKITILGTRLDSLQSLLSKLPGKQPLSEKEENRRMDMLANLRSKVNQMASTLNMSNFANKDRLVGPEVKPDVMSRTVGLDNNGLVGFQRQIMKGYLSRLFDNILLGICSFNLIALFFFFLFDKLINYTH* 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3335 177 MobiDBLite consensus disorder prediction 27 49 - -
Mtr5g3335 177 PANTHER SYNTAXIN 3 143 IPR045242 -
Mtr5g3335 177 PANTHER TARGET SNARE COILED-COIL DOMAIN-CONTAINING PROTEIN-RELATED 3 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3335 Mtr-Chr5 42255155 42259527 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3335 4 141 SNARE and Associated Proteins AT1G16240 61.871 4.10e-60 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3335 K08503 - gmx:100782666 222.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3335 5 42255155 42259527 Mtr5g3335 5 42255155 42259527 ECH
Mtr3g1373 3 24916889 24921435 Mtr5g3335 5 42255155 42259527 PCT