Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3332 ATGGAAAGTGATCACAGAAAATATTACACTATAGATTGTGGTGGGAATCAAGTTGCAAATACCATCATTGTTGACCAACAAGGAAAAGGAGCATTCCAAACAATTCAAGCTGCCATTGATTCTATAAAGAGTCAAAATAATCAATGGATTATGATTAATATAAATCCTGGCATATATAAGGAAAAAGTTCTTATACCTGATAGAAAGTCGTGCATTATTTTAAAAGGATCAGGTAGCAATAACACAATCATTACTTACGACGATTCATCTCATAAAGTTGGCACATCCATGAGTGCTACATTTCATTCATCTCCACCTAATGTAATTTTGAATGGCATTACATTCAAGAACACATATGGATCTGATGGACCAGCAGTAGCAGCTTCAATATATGGTGATAAGTCTGCGATTTTTGAATGTAGTTTCATTGGTTATCAAGATACTTTGCTATCATCAAAGGGACGTCAATACTTTAAAAATTGTTATATTCAAGGTGAAGATGACTTCATTTTTGGGGAAGGTCAATCTTATTTTGAGAATTGTGTAATGAATGCCACTCAAGCAGAATCTAAACCTTCAGGTTTTGTAACATCACAACGTAGGGAATCACCAAATGATCCAAATGGTTTCGTTTTTAGAGGAGGGTACGTTGTTGGAAATGGTACAGTGAGTCTTGGAAGACCTTGGGGCCCTTACTCAAGAGTTATATTTTGGGGAACATATTTTACGTCAGTGGTAACTCCTCAGGGATGGGATGCCCCAGGTTTAGATGAAGGCCAAGAGCAAAACCTCACATATGCAGAAGTTAATTGTACAGGACCTGGGGCCAACATTGAGAAACGTGTCAAGTGGGAAAAGAAACCAGATAGCTTAAACTTGAATGAATATACTTTGTCATCTTTCATAAATAATGATGGATGGCTTGCCAACGTACCATCTATTTTATTGTAG 951 0.3659 MESDHRKYYTIDCGGNQVANTIIVDQQGKGAFQTIQAAIDSIKSQNNQWIMININPGIYKEKVLIPDRKSCIILKGSGSNNTIITYDDSSHKVGTSMSATFHSSPPNVILNGITFKNTYGSDGPAVAASIYGDKSAIFECSFIGYQDTLLSSKGRQYFKNCYIQGEDDFIFGEGQSYFENCVMNATQAESKPSGFVTSQRRESPNDPNGFVFRGGYVVGNGTVSLGRPWGPYSRVIFWGTYFTSVVTPQGWDAPGLDEGQEQNLTYAEVNCTGPGANIEKRVKWEKKPDSLNLNEYTLSSFINNDGWLANVPSILL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3332 316 PANTHER PECTINESTERASE 10 314 - -
Mtr5g3332 316 Pfam Pectinesterase 22 304 IPR000070 GO:0030599|GO:0042545
Mtr5g3332 316 Gene3D - 15 313 IPR012334 -
Mtr5g3332 316 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 10 314 - -
Mtr5g3332 316 SUPERFAMILY Pectin lyase-like 18 309 IPR011050 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3332 Mtr-Chr5 42227739 42232181 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3332 12 253 Carbohydrate Esterase AT2G19150 47.809 2.24e-67 211
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3332 - - mtr:MTR_5g088290 397.512