Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3316 ATGTCTTCTTTGGCTTCAGAGATTCTTCAAGAACTTGAATCACTGAAGAGCGAAAAAACCAAAATCGAACAAAAAATATCACAGTTAGAATCTCAATTGAAAGATATTAATCTCCCAAAACAACACGCTTCTTCTGCTTCTGCTGCATCATCCAATGGTTCTTCTTCACCATACCCCACAAATGGATTGGAACCTCACATGATTCATAGATACAGTCGCCACCTTGTTCTTCCTTCCTTTGGTGTTCAAGGGCAGGCAAATCTGCTGAAGTCATCAATTTTAGTTGTGGGAGCTGGAGGATTGGGTGCTCCTGCATTGTTATATTTTGCAGCTTCTGGTGTTGGCAAATTGGGTATTGTTGATCATGACAAGGTTGAGCTCAGTAATATGCATAGACAGATTATACACACTGAAGCATATATTGGTCAGCCAAAAGTGAAATCCGCTGCTGCTGCTTGTCGCGCGGTCAACTCATCTGTTGAAGTCGTGGAACACGAGGAAGCTTTGCGAACTTCCAATGCTTTGGAAATTTTCAGCAAATATGATATAATAGTGGATGCAACAGATAATGCTCCCACCCGGTATCTGATCAGTGACTGCTGTGTGGTACTAGGAAAGCCCCTCGTATCAGGTGCCGCTGTGGGATTGGAAGGGCAGCTCACTATCTACAATCACAACGGTGGTCCTTGCTATCGATGCCTCTTTCCAACTCCACCACCTAGATCAGCATGCCAAAGTTGCGCCGACAATGGAGTGCTAGGAGTAGTTCCTGGCATAATTGGCTGTCTCCAAGCTCTCGAGGCAATTAAGATTGCTGCTGCAGTTGGTGAACCACTCTCCGGAAGGATGCTTCTTTTTGATGCATTGTCTTCACGAATCCGTGTCGTGAAAATCAGAGGAAGGTCTATGCATTGTGAAGCTTGTGGAGATAATGCAAGATTTAATAAGCAGTACTTCCGAGAATTTGATTATGAGAAGTTCACTCAGACTCCCTTGCGTGTGCCTCCATTGAAGTTAAATCTACTTCCTAGTGAATCAAGAATCAGCAGCATGGAGTACAAAGAAATAACTCTCAACAAGGAACCACATGTGCTTGTTGATGTTAGACCAGCTCACCATTTCAAGATTGTGTCACTTCCGAATTCCTTGAACATTCCATTCTCAACTTTAGAGTCTAGGTTGCCGGAAATATCGTCAATTTTGAAGAAAGACGAAGAAGAGGAAAAAGGCGCAGTTTCTGAATCAAGTGCACAATTATATGTAGTATGCAGAAGGGGAAATGATTCTCAAAGGGCTGTTCAATACCTTCACAAAATGGGTTTTACCTCTGCTAAGGATATTGTTGGGGGTTTGGAGTCTTGGGCTCAAAATGTTGATCCTAACTTCCCCACTTATTAG 1398 0.4299 MSSLASEILQELESLKSEKTKIEQKISQLESQLKDINLPKQHASSASAASSNGSSSPYPTNGLEPHMIHRYSRHLVLPSFGVQGQANLLKSSILVVGAGGLGAPALLYFAASGVGKLGIVDHDKVELSNMHRQIIHTEAYIGQPKVKSAAAACRAVNSSVEVVEHEEALRTSNALEIFSKYDIIVDATDNAPTRYLISDCCVVLGKPLVSGAAVGLEGQLTIYNHNGGPCYRCLFPTPPPRSACQSCADNGVLGVVPGIIGCLQALEAIKIAAAVGEPLSGRMLLFDALSSRIRVVKIRGRSMHCEACGDNARFNKQYFREFDYEKFTQTPLRVPPLKLNLLPSESRISSMEYKEITLNKEPHVLVDVRPAHHFKIVSLPNSLNIPFSTLESRLPEISSILKKDEEEEKGAVSESSAQLYVVCRRGNDSQRAVQYLHKMGFTSAKDIVGGLESWAQNVDPNFPTY* 466
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3316 465 CDD RHOD_ThiF 339 465 - -
Mtr5g3316 465 MobiDBLite consensus disorder prediction 39 64 - -
Mtr5g3316 465 Hamap Adenylyltransferase and sulfurtransferase MOCS3 [MOCS3]. 29 465 IPR028885 GO:0002143|GO:0004792|GO:0005829
Mtr5g3316 465 Pfam ThiF family 71 306 IPR000594 -
Mtr5g3316 465 PANTHER UBIQUITIN-ACTIVATING ENZYME E1 5 451 IPR045886 -
Mtr5g3316 465 Pfam Rhodanese-like domain 358 456 IPR001763 -
Mtr5g3316 465 Gene3D - 346 465 IPR036873 -
Mtr5g3316 465 CDD ThiF_MoeB_HesA_family 70 298 - -
Mtr5g3316 465 SMART rhod_4 349 460 IPR001763 -
Mtr5g3316 465 Coils Coil 5 32 - -
Mtr5g3316 465 PANTHER ADENYLYLTRANSFERASE AND SULFURTRANSFERASE MOCS3 5 451 - -
Mtr5g3316 465 MobiDBLite consensus disorder prediction 39 61 - -
Mtr5g3316 465 Gene3D - 65 314 - -
Mtr5g3316 465 ProSiteProfiles Rhodanese domain profile. 359 463 IPR001763 -
Mtr5g3316 465 SUPERFAMILY Activating enzymes of the ubiquitin-like proteins 68 432 IPR035985 GO:0008641
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3316 109 465 Sulfurtransferasese or Rhodanese AT5G55130 71.709 0.0 550
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3316 K11996 - gmx:100814736 742.651
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3316 5 42049152 42053763 Mtr5g3316 5 42049152 42053763 ECH