Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3285 ATGGGTGTTTGTCTGAGCAGAAAAGAATTAGAACCAAAACATAGACATGTTGGTGTTTCTGGTAAGCACAATCAAAATAAAAATCCCAATCACAATCACTGCTACGATCATAATAACAAGAATCATGAACCATTTGTGAAGCAATCAAAACCCCCTTTTCAACAACCTTACCAATTACCAGATAAACATGCACCAAGTCCAAAACCAACTGTTAAAAGGTCAGATACAAACACAATTCCAGGTAAACAATTTGAAGATGTGAAACAAATTTACACACTTGGGAAAGAATTAGGAAGAGGACAATTTGGCGTGACTTACCTTTGTACTGAGAATTCAACTGGATTGAAATATGCTTGCAAATCAATTTCTAAGAGGAATCTTGTTAGTGAACCTGATAAGGAAGAAATAAAGAGGGAGATTCAAATCATGCAGCATATGAGTGGACAACCAAATATTGTTGAGTTTAAAGGTGCTTATGAGGATGAAAATTCAGTTCATGTTGTTATGGAACTTTGTGCTGGTGGTGAACTTTATGATACGATTATTGCCAAAGGGAAATATAGTGAAAGAGATGCAGCTTCAATTTTTAGACAAATTGTTAATGTTGTTCATATTTGTCATTTTATGGGTGTGATGCATAGAGATTTGAAGCCAGAAAATTTCTTGTTGTCTAGTAAGGATGATAAGGCAACTATCAAGGCCGCTGATTTCGGTTTGTCGGTTTTCATTGAAGAAGGAAAGGTATATCAGGATATAGTTGGAAGTGCTTATTATGTTGCGCCAGAAGTTCTACGTCGTAAATATGGGAAGGAAATAGATATATGGAGTGCAGGAGTTATATTGTATGTCTTACTTTCTGGTGTGCCTCCATTTTGGGCAGAGACGGAAAAAGGAATATTTGATGCCATATTGCAAGGTCGTATTGACTTTGAAAGTCTTCCATGGCCAATCATATCAAACTGTGCTAAGGACCTTGTTAGCAAGATGCTTATACAAGATCCAAACAAACGTATCACAGCTTCTCAGGTTCTAGAGCATCCTTGGCTTAAAGAAGGTAGAGATGCTTCTGATAAACCAATAGAAAGTGCAGTTCTTTCCAGAAGAGATTCGGCTCAATATTTCTATCTTCAATCACATATGAGGAATTGTTGGCAGGATTACAAAGACTCAGCTCAATATTCGGATAATTAA 1191 0.3652 MGVCLSRKELEPKHRHVGVSGKHNQNKNPNHNHCYDHNNKNHEPFVKQSKPPFQQPYQLPDKHAPSPKPTVKRSDTNTIPGKQFEDVKQIYTLGKELGRGQFGVTYLCTENSTGLKYACKSISKRNLVSEPDKEEIKREIQIMQHMSGQPNIVEFKGAYEDENSVHVVMELCAGGELYDTIIAKGKYSERDAASIFRQIVNVVHICHFMGVMHRDLKPENFLLSSKDDKATIKAADFGLSVFIEEGKVYQDIVGSAYYVAPEVLRRKYGKEIDIWSAGVILYVLLSGVPPFWAETEKGIFDAILQGRIDFESLPWPIISNCAKDLVSKMLIQDPNKRITASQVLEHPWLKEGRDASDKPIESAVLSRRDSAQYFYLQSHMRNCWQDYKDSAQYSDN* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3285 396 PANTHER CALCIUM-DEPENDENT PROTEIN KINASE 21-RELATED 50 368 - -
Mtr5g3285 396 SUPERFAMILY Protein kinase-like (PK-like) 73 378 IPR011009 -
Mtr5g3285 396 MobiDBLite consensus disorder prediction 1 82 - -
Mtr5g3285 396 Gene3D Transferase(Phosphotransferase) domain 1 178 385 - -
Mtr5g3285 396 ProSiteProfiles Protein kinase domain profile. 91 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3285 396 Pfam Protein kinase domain 91 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3285 396 Gene3D Phosphorylase Kinase; domain 1 93 177 - -
Mtr5g3285 396 CDD STKc_CAMK 91 348 - -
Mtr5g3285 396 ProSitePatterns Protein kinases ATP-binding region signature. 97 120 IPR017441 GO:0005524
Mtr5g3285 396 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Mtr5g3285 396 MobiDBLite consensus disorder prediction 29 44 - -
Mtr5g3285 396 PANTHER SERINE/THREONINE-PROTEIN KINASE 50 368 - -
Mtr5g3285 396 SMART serkin_6 91 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3285 Mtr-Chr5 41724413 41727590 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3285 66 367 EF-hand Containing Proteins AT3G20410 78.477 1.73e-177 503
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Mtr5g3285 Pkinase 2.8e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3285 K13412 - gmx:100794852 548.895