Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3263 ATGGCAGACATTGCTCTCTCCGTTGCAGCCAAGGTTTCAGAATATTTGGTCAAGCCTTTACTACACCATGCTCGTTACATGTTCGGTTTCAACAAAATCGTTACAAATCTTTATGATAAAAAAGACAAGTTGATATTAACCCAAAAGAGTGTGAATGAACACATGAAAGAAGCCAGAAGGAAAACCGAAATAATTGAGGAATCTGTAGAGAGGTGGATGAATGATGTGAAAAATGTCTTAAAAGATGTAGAAAAGTTGGAAGAAAAAACTAAAGAAAACAAGGGGTGTTACCGTGTACCTTTGCAATACTTTCTAGCAAAAGAAGTAGAAAATGCGACAGAGAAAATGATGAATCTAAATAGCTGCAACTTTGAGCCATTTTCTAGACGCACTGAACTTCCTGGCATGAAATACTTTTCATCCAAAAACTTTGTGTATTCCAAGTCCACTGAGCATGCTTATAATAAACTCATGGAGGCATTGAAAGATAGAAAATATCACATGATTGGATTTCATGGGATGGGAGGATCTGGTAAAACCACTTTGGTGAAAGAGGTTGGCAAGAAAGCTGAGGAGTTGCAACTTTTTGACAAAGTTGTTATGGCTGTTGTCTCTCACAATCCAGAAGTGACATATATCCAAGGTCAAATTGCAGACAGTTTGGATTTGATATTGAGGGAAGAGTCACCAATTGGTAGAGCACAAAGACTTTCAACAAGTTTACAAAACGAGAGGACTCTTGTGATCTTAGATGATGTGTGGGAGAATCTTGAATTTGAAGCCATAGGGATTCCACCCTGTTGCACTGTCTTGTTAACTACTCGCGGTCGAGATGTATGCGTGTGTATGAACTGTCAAATTACAGTTGAGTTGTCTCTCTTGGATGAGGAGGAAGCATGGACTTTGTTTAAAAGGTGTGCAGATATCATTGATGACTCGCCATATGCCTTGAAGTTGAAGAATGTGCCAAGGAAAATTGCTAAAAAATGCAAAGGACTCCCGATTGCAATTGTGACTATGGCAAGTATGTTAAGAGGAAAGAGAGTTGAAGAGTGGGAGTTAGCATTGCTTAGACTAGAGGAAACACAGACAATAGATGGTGAAGAAGTACTGAGTAGTTGTTATGCATGTATCAAGTTAAGCTATGACAATTTGACAAAGCAAGTGTCTAAAAATCTCTTCTTATTGTGCTCAATGTTTCCTGAAGACTGGGAGATCAATGTGGAAGATTTGGTTAGGTACATTAAGGGACTTGGACCAGCTGCTGGGACTATTGGCACAATGGAGAAAGTGAGGAGAGAGATACAAGTGACCTTGCTCATCCTCAAAGATTCATATTTGTTGCAACAATGTGGCAAAAAAGAATTTGTGAAAATGCATGACTTGGTTCGTGATGCAGCCTTATGGATTGCTTCCAAAGAAGGTAAAGCAATTAAGGTACCTACCAAAACATTGGCAGAAATAGAAGAAAATGTAAAAGAGTTGACTGCAATATCCTTATGGGGCATGGAGAATCTTCCTCCTGTTGATCAATTGCAGTGCCCGAAACTCAAGACTCTTCTACTTCATTCCACGGACGAATCGTCTTTACAATTACCAAATGCATATTTTGGAAAGATGCAAATGCTGGAAGTCTTGGGGATTACAAAATTTTACTACACGTGGCGCAACTTGTACACCCTGCGCTACTTGAGTTCATCATTGTCTATCTTAGCCATGCCACAATCGATAGAAAGATTAACCATGCTTCGAGATCTTTGTCTAAGAGGATATGAATTAGGCGATATCTCTATACTGGCAAGCTTAACAAGACTCGAGATTCTCGATCTACGTAGTTCAACTTTCGATGAACTGCCACAAGGAATCGCAACTTTGAAGAAACTAAGACTACTGGATATATACACTTGTCGCATCAAGAAGAGCAACCCTTATGAAGTGATAATGAAGTGTACACAGCTAGAGGAATTGTATATGTGGAGAGTTGAAGATGATTCTTTACATATTAGCTCTTTACCGATGTTTCATAGGTATGTAATTGTATGCGACAAGTTCAGAGAAAACTGTAGATTTCTCATAGATGCTTATCTAGAGGACCATGTGCCATCAAGAGCATTATGCATAGACCAGTTTGATGCCTCAGCTCTTATTCATGATTCATCTTCAATCAAAGATTTGTTTATGAGATCGGAACACCTTTACTTGGGGCATCTTCGAGGAGGATGCAAAAACATCGTCCCGCACATGGACCAAGGAGGAATGACCGAGCTGATCGGTCTAATACTCGAGTCTTGTTCAGAGATAGAATGTCTCGTTGATACTACAAATACCAATTCTCCAGCATTCTTTGAGTTGGTTACCTTGAAGTTGATATGCATGAATGGTCTTAAACAAGTTTTCATTGATCCAACTTCCCAATGCTCTCTTGAAAAAATAGAAGACCTGCAGATAGAGTATTGTACACAACTGAGTAGCATATCTTTTCCAAGGAAATCAAATATGTGTAATCTTAAGATTCTCAGACTACAGTGGTGTCCAATGCTAACATCATCACTTTTCACACCCACCATTGCTCGAAGCTTAGTGCTACTAGAGGAATTAAAATTATTTGATTGCAGCAAGTTGAAGCATATCATAGCAGAAGAGTATGTGGAAGTTGAGAATGCTAATTATCCAAATCATGCCTTGAAAGTGTTCCCAAATCTAAGGATTCTTCATGTGCATGGATGTCAAGGTTTAGAATCGATCTTTCCAATCACTTTTGCTCAAACTCTAGAGAGATTAGAGAAGATAGTTATATGGTACAACTTTGGTTTAAATTATGTATTTGGTACACACAATGATTACAAGAATAGTAGCGGGAGTGAAACTAAGACCAACATCAACCTCCTTGCTTTAAGAAGAATCTCACTTGTATCATTGTTGAATTTGATTGACATTTTCCCCTCATATTGTCATCCAAATTCACCAAATTTGAAAGAGATAGAATGCAGAGAATGTCCTCGCTTTTCAACCAATGTACTGTACAAGACTATGATCGGTTCAGATCATCAGAAAGGTCGCATGGCTACAGAGGAGAGAGTAATATTTCCTGATAGTGGAGAACCAGTCCTAGCCCTGGAATGTCTTACCATTGAGAACTCTATGGTACTAGAAGGTATTTTTCAACTGCAAGCTGAAAAACAATCGCCCTTGAACTCAAGCTTATCTCATTTATGTTTAAAGGAATTGCCTGAGTTGAGGCTTATTTGGAAGGGTCCAAAAGATATCCTTACCCTTCAGAAACTTAAGAGTTTGGTTCTGGTTGGATGTAGAAACTTGGAAACCATCTTCTCTCCCACTATTGTTGGAAGCCTTGCAGAGCTAAGTGAACTTGTTGTAAGCAAGTGCGAAAAATTGGAGAACATCATTTGTTCAGATCAAGATGGAAACTTATCTACCTTTTCAAAACCAGTGTGCTTCCCTCTACTGTCCATAGTTCATGTCTTTCAGTGCAACAATTTGAAATGCCTTTTCTCTCATTCATTGCCTTCTCCATTTCCTGAACTGGAATTTATTACTGTAGAGGAGTGTTCTGAAATAGAACAGGTTTTCTTTTTCAATGATGATGATAGAGGCCAACATGTGACTGAAGAAAACAAACAACGTTTAATTCTTCCAAAATTGCGTGAGGTGAAACTCGTATGTTTGCCAAACTTCACTGAATTTTGCCGAGGGCCTTATAAACTGCAGCAAAATGTGAAGCATTATACAGTAAGGCACTGTCCCAAGTATACTTATGCCTGGTTTCCGACTGAAAATCAGGAATGGAATCCATTTTCCTCTATACATTTACAATCAACTGGGGATGTTTGGGAAATGGGATTAGGATCAAGCTCAACTAGTACTTTTGCTGTTGCTACTAGTAACAGTGTTAACGATCCTGAGATACAAGATAAGGTGATCAAGTTGGAAACAAACTTAGAATCTGAAAGACAAAGAAGAAGATTGATGGCGTTGGAGTTACAGGTTGAGAGTGAAAGGCGAAGACTAATAGAACTGAAACTGGAAGCTGAGCAAGAAAGACGACGGATCATGGAAGAAACGTTGCTTTCTTTCTTTCATAAAATGCTTGGAAGGGTCCCTCAACAATTTTCTTACCTTCTTTCTCAAACTCGATTGGCACAAAATGAAGAAAATGAAGATCAGACTTTATTTGATGTATCCATACAGTCCCTCTGA 4218 0.3869 MADIALSVAAKVSEYLVKPLLHHARYMFGFNKIVTNLYDKKDKLILTQKSVNEHMKEARRKTEIIEESVERWMNDVKNVLKDVEKLEEKTKENKGCYRVPLQYFLAKEVENATEKMMNLNSCNFEPFSRRTELPGMKYFSSKNFVYSKSTEHAYNKLMEALKDRKYHMIGFHGMGGSGKTTLVKEVGKKAEELQLFDKVVMAVVSHNPEVTYIQGQIADSLDLILREESPIGRAQRLSTSLQNERTLVILDDVWENLEFEAIGIPPCCTVLLTTRGRDVCVCMNCQITVELSLLDEEEAWTLFKRCADIIDDSPYALKLKNVPRKIAKKCKGLPIAIVTMASMLRGKRVEEWELALLRLEETQTIDGEEVLSSCYACIKLSYDNLTKQVSKNLFLLCSMFPEDWEINVEDLVRYIKGLGPAAGTIGTMEKVRREIQVTLLILKDSYLLQQCGKKEFVKMHDLVRDAALWIASKEGKAIKVPTKTLAEIEENVKELTAISLWGMENLPPVDQLQCPKLKTLLLHSTDESSLQLPNAYFGKMQMLEVLGITKFYYTWRNLYTLRYLSSSLSILAMPQSIERLTMLRDLCLRGYELGDISILASLTRLEILDLRSSTFDELPQGIATLKKLRLLDIYTCRIKKSNPYEVIMKCTQLEELYMWRVEDDSLHISSLPMFHRYVIVCDKFRENCRFLIDAYLEDHVPSRALCIDQFDASALIHDSSSIKDLFMRSEHLYLGHLRGGCKNIVPHMDQGGMTELIGLILESCSEIECLVDTTNTNSPAFFELVTLKLICMNGLKQVFIDPTSQCSLEKIEDLQIEYCTQLSSISFPRKSNMCNLKILRLQWCPMLTSSLFTPTIARSLVLLEELKLFDCSKLKHIIAEEYVEVENANYPNHALKVFPNLRILHVHGCQGLESIFPITFAQTLERLEKIVIWYNFGLNYVFGTHNDYKNSSGSETKTNINLLALRRISLVSLLNLIDIFPSYCHPNSPNLKEIECRECPRFSTNVLYKTMIGSDHQKGRMATEERVIFPDSGEPVLALECLTIENSMVLEGIFQLQAEKQSPLNSSLSHLCLKELPELRLIWKGPKDILTLQKLKSLVLVGCRNLETIFSPTIVGSLAELSELVVSKCEKLENIICSDQDGNLSTFSKPVCFPLLSIVHVFQCNNLKCLFSHSLPSPFPELEFITVEECSEIEQVFFFNDDDRGQHVTEENKQRLILPKLREVKLVCLPNFTEFCRGPYKLQQNVKHYTVRHCPKYTYAWFPTENQEWNPFSSIHLQSTGDVWEMGLGSSSTSTFAVATSNSVNDPEIQDKVIKLETNLESERQRRRLMALELQVESERRRLIELKLEAEQERRRIMEETLLSFFHKMLGRVPQQFSYLLSQTRLAQNEENEDQTLFDVSIQSL* 1406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3263 1405 Gene3D - 293 381 IPR042197 -
Mtr5g3263 1405 Gene3D Ribonuclease Inhibitor 474 677 IPR032675 -
Mtr5g3263 1405 SUPERFAMILY L domain-like 458 1138 - -
Mtr5g3263 1405 Coils Coil 1322 1360 - -
Mtr5g3263 1405 Gene3D - 382 468 IPR036388 -
Mtr5g3263 1405 PANTHER DISEASE RESISTANCE RPS5-LIKE PROTEIN 5 1140 - -
Mtr5g3263 1405 Pfam NB-ARC domain 149 384 IPR002182 GO:0043531
Mtr5g3263 1405 Gene3D Ribonuclease Inhibitor 1037 1200 IPR032675 -
Mtr5g3263 1405 Gene3D - 139 290 IPR027417 -
Mtr5g3263 1405 PRINTS Disease resistance protein signature 168 183 - -
Mtr5g3263 1405 PRINTS Disease resistance protein signature 240 254 - -
Mtr5g3263 1405 PRINTS Disease resistance protein signature 330 344 - -
Mtr5g3263 1405 PRINTS Disease resistance protein signature 623 639 - -
Mtr5g3263 1405 Coils Coil 55 93 - -
Mtr5g3263 1405 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 397 IPR027417 -
Mtr5g3263 1405 Gene3D Ribonuclease Inhibitor 703 1010 IPR032675 -
Mtr5g3263 1405 PANTHER - 5 1140 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3263 Mtr-Chr5 41446577 41456099 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3263 169 643 WRKY Transcription Factor Family AT5G45050 24.907 2.51e-14 76.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3263 - - mtr:MTR_5g092190 2758.79