Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3248 ATGGAGTCCAATATACTTTTTTTTGTACTTCTCTTCGGTTTCACTTCATTGATTTTCATCTCACACTTTGCTTCAGCAGCTACACTAAAGCTCAACACTCAAGAGGTGAAGGCATTGAAGGAGATAGGGAACAAGATTGGGAAGAAAGATTGGGATTTTGGAGTTGACCCCTGCAGTGGAAAAGGAAAATGGAATGTTTCTGATAGTAGAAAAGGCTTTGAGAGTGCTGTGATTTGTAATTGTTCATTCAACCACAATTCTTCTTGCCATGTTGTAAGCATATTCTTGAAGGCTCAGAATCTGTCTGGCACCCTTTCACCAGAGTTTTCCAAGCTTCCTCATCTCAAAATATTGGACCTTAGTCGTAACATCATCACTGGTTCTATCCCTCAACAATGGGCTAAAATGAACTTGGTTGATTTATCTTTCATGGGAAACAGATTTTCAGGGCCATTCCCTACAGTTCTCACCAATATTACAACCCTCAAAAACTTAAGTATTGAAGGAAATCAATTTTCAGGCTTTATTCCTGAAGACATAGGGAAGCTGATCAACTTAGAAAAACTCGTTCTGCAATCAAATAGATTCACCGGAGCATTGCCGTCTGCGTTTTCCAAGTTGACCAAGTTGAATGATTTGAGGATAAGTGACAATGACTTCTCTGGGAAGATACCTGATTTCATTAGTAAATGGACATTGATAGAAAAACTGCACATTGAAGGTTGCTCTCTAGAGGGACCTATACCTTCCAGCATATCTGCATTGACAGTATTGAGTGATTTGAGGATAACTGACTTGAGAGGCAGTAGAAGTTCTACTTTTCCACCACTAAGTAATATGAAATCCATGAAGACACTTGTTCTGAGAAAATGTTTGATTAAAGGAGAGATTCCAGAATATATTGGTGAAATGGCAAAACTGAAAGTCTTAGATTTGAGTTTCAATAGCTTGAGTGGAAAGATACCTGAATCTTTTCGTGACCTTGACAAAGTGGACTTCATGTATCTTACTAGGAACAACTTATCAGGAACTATACCGGATTGGGTCCTTAAAAATAACAAAAATATTGATGTATCTTACAATAACTTTGAATGGGAAAGCTCAAGTCCAACTGAATGTCAACGAGGGAGTGTAAACCTTGTCGAGAGCTACTCTTTATCTGCGACAAAGAAAAGTAACATTCATTCATGCCTAAAAAGAAACTTCCCATGCACGTCGAAGAATCCACGACATTACTCCCTACGCATTAACTGCGGAGGTAATGAAGCAAATGTTAGTGGTAATATTTATACAGCTGACATAGAACGAAAAGGCGCTTCAATGTTATATATTTCTGCTGAGGATTGGGCTCTTAGCAGCACAGGAAGCTTCATGGACAATGATATTGACTCTGATCCCTATATCGTGACCAATACTTCTAGTCTTCAGAATGTTTCTGTGATCAATTCGAAACTGTATACAACAGCTCGCGTTTCGCCCCTTTCCCTCACATACTATGGACTTTGTATGATAAATGGAAATTACACTGTCCAACTTCACTTTGCAGAGATTATTTTCATCAATGATAGGTCATTAAACAGTCTCGGGAGACGGATATTCGATGTCTACATCCAGGGGAAATTGGTGCTGAGAGACTTTGATATCGAACGAGAAGCTGGTGGTGCTGAAAAGCCAATTGTTAAAAAATTCAATGCTACTGTCACAGAAAATACATTGAAGATTCAATTCTACTGGGCTGGGAAAGGAACCACTGGTATACCAACAAGAGGAGTTTATGGTCCTTTAGTATCTGCTATTTCAGTGGATCCTAATTTTAAACCTCCATCAGAGCATGGAAACAGAACTCGTGTCATACTGCTGGCAGTTGGCATAGTTTGCGGTTTTCTAGCTGTTGTTCTTATTATGGTGGCTGTCATGAGGAGGAAGGGATTGTTAGGGGGCAAGGATCCTGTGTATAAAGAGCTTAGAGGTATAGATTTGCAGACAGGATTGTTCACTTTAAGACAAATAAAAGTAGCCACAAAAAACTTTGATGCAGCAAATAAACTTGGAGAAGGTGGCTTTGGTTCTGTTTACAAGGGGCAGCTATCAGACGGTACAGTAATTGCAGTAAAGCAGCTCTCATCAAAATCAAAGCAAGGAAACCGTGAGTTTGTGAATGAGATAGGAATGATATCTGGACTTCAACATCCAAATCTTGTTAAGCTCCATGGATGTTGTGTGGAAGGGAACCAACTAATTCTAATATACGAGTATATGGAAAATAATTGTCTATCTCGCATTCTTTTTGGGAAAGGATCAGAGAGTAAAAAAAAACTGGATTGGCTTACCAGGAAGAAAATTTGCCTTGGTATAGCTAAAGCTTTGGCTTATCTTCATGAAGAGTCAAGAATTAAAATCATACATAGGGATATAAAGGCAAGTAATGTGTTGCTAGACAAGGACTTTAATGCCAAAGTTTCAGATTTTGGTTTAGCAAAACTTATTGAAGATGACAAAACGCATGTCAGCACTCGGATTGCAGGAACAGTTGGTTATATGGCTCCTGAGTATGCAATGCGCGGTTACTTAACCGACAAGGCAGATGTTTATAGCTTTGGCGTGGTTGCATTAGAGATTATAAGTGGAAAGAGCAATACAAATTACAGGCCGGACGATGAATTTTTCTACCTTCTTGATTGGGCCTATGTTTTACAAGAGAGAGGAAATCTTCTGGAACTAGTTGATCCAGACATTGGTTCAGAATATTCAACTGAGGAAGCCATTGTGATGCTAAATGTGGCTCTTTTGTGTACTAATGCGTCTCCTACGCTAAGGCCAACAATGTGCCAAGCTGTAAGCATGCTTGAAGGTTGGACCAACATTCAGGATCTCCTTTCGGATCCAGGGTATTCGGCTGCTGGTTCAAGTTCCAAACATAAGAGCATAAGGAGTCACTTCTGGGAGAATCCAAGTAGATCACAAAGCATGTCCATACCTACTGTTTATACTGATTCCTCTTCCTCACATGTTGCAACAGAAGAGAGCAACCATCTTGTAAAAACTAATTCAGTTGGATCAGACAAATAA 3069 0.3936 MESNILFFVLLFGFTSLIFISHFASAATLKLNTQEVKALKEIGNKIGKKDWDFGVDPCSGKGKWNVSDSRKGFESAVICNCSFNHNSSCHVVSIFLKAQNLSGTLSPEFSKLPHLKILDLSRNIITGSIPQQWAKMNLVDLSFMGNRFSGPFPTVLTNITTLKNLSIEGNQFSGFIPEDIGKLINLEKLVLQSNRFTGALPSAFSKLTKLNDLRISDNDFSGKIPDFISKWTLIEKLHIEGCSLEGPIPSSISALTVLSDLRITDLRGSRSSTFPPLSNMKSMKTLVLRKCLIKGEIPEYIGEMAKLKVLDLSFNSLSGKIPESFRDLDKVDFMYLTRNNLSGTIPDWVLKNNKNIDVSYNNFEWESSSPTECQRGSVNLVESYSLSATKKSNIHSCLKRNFPCTSKNPRHYSLRINCGGNEANVSGNIYTADIERKGASMLYISAEDWALSSTGSFMDNDIDSDPYIVTNTSSLQNVSVINSKLYTTARVSPLSLTYYGLCMINGNYTVQLHFAEIIFINDRSLNSLGRRIFDVYIQGKLVLRDFDIEREAGGAEKPIVKKFNATVTENTLKIQFYWAGKGTTGIPTRGVYGPLVSAISVDPNFKPPSEHGNRTRVILLAVGIVCGFLAVVLIMVAVMRRKGLLGGKDPVYKELRGIDLQTGLFTLRQIKVATKNFDAANKLGEGGFGSVYKGQLSDGTVIAVKQLSSKSKQGNREFVNEIGMISGLQHPNLVKLHGCCVEGNQLILIYEYMENNCLSRILFGKGSESKKKLDWLTRKKICLGIAKALAYLHEESRIKIIHRDIKASNVLLDKDFNAKVSDFGLAKLIEDDKTHVSTRIAGTVGYMAPEYAMRGYLTDKADVYSFGVVALEIISGKSNTNYRPDDEFFYLLDWAYVLQERGNLLELVDPDIGSEYSTEEAIVMLNVALLCTNASPTLRPTMCQAVSMLEGWTNIQDLLSDPGYSAAGSSSKHKSIRSHFWENPSRSQSMSIPTVYTDSSSSHVATEESNHLVKTNSVGSDK* 1023
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3248 1022 CDD STKc_IRAK 683 951 - -
Mtr5g3248 1022 SUPERFAMILY L domain-like 89 368 - -
Mtr5g3248 1022 ProSitePatterns Protein kinases ATP-binding region signature. 683 705 IPR017441 GO:0005524
Mtr5g3248 1022 Pfam Leucine rich repeat 161 220 IPR001611 GO:0005515
Mtr5g3248 1022 Pfam Leucine rich repeat 282 341 IPR001611 GO:0005515
Mtr5g3248 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 293 351 - -
Mtr5g3248 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 84 293 - -
Mtr5g3248 1022 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 386 992 - -
Mtr5g3248 1022 Gene3D Ribonuclease Inhibitor 268 409 IPR032675 -
Mtr5g3248 1022 MobiDBLite consensus disorder prediction 983 1022 - -
Mtr5g3248 1022 Pfam Protein tyrosine and serine/threonine kinase 680 944 IPR001245 GO:0004672|GO:0006468
Mtr5g3248 1022 Pfam Malectin domain 413 599 IPR021720 -
Mtr5g3248 1022 ProSiteProfiles Protein kinase domain profile. 677 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3248 1022 SUPERFAMILY Protein kinase-like (PK-like) 661 975 IPR011009 -
Mtr5g3248 1022 Gene3D - 410 603 - -
Mtr5g3248 1022 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 84 293 - -
Mtr5g3248 1022 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 386 992 - -
Mtr5g3248 1022 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 293 351 - -
Mtr5g3248 1022 Gene3D Ribonuclease Inhibitor 32 267 IPR032675 -
Mtr5g3248 1022 Gene3D Phosphorylase Kinase; domain 1 651 752 - -
Mtr5g3248 1022 Gene3D Transferase(Phosphotransferase) domain 1 753 961 - -
Mtr5g3248 1022 ProSitePatterns Serine/Threonine protein kinases active-site signature. 800 812 IPR008271 GO:0004672|GO:0006468
Mtr5g3248 1022 SMART serkin_6 677 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3248 Mtr-Chr5 41313627 41320947 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3248 213 1013 Receptor kinase-like Gene Family AT1G07650 63.985 0.0 1002
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Mtr5g3248 PK_Tyr_Ser-Thr 2.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3248 - - gmx:100784864 1649.03