Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3241 ATGGAAACCAAGAAGCTTCACTCTCGTTTCTCACTCGGCAGACAATCTTCCCTCGCACCGGATCACGACGGTTCCGCCACCGTCAACTCACTGGTAACCGACTCCGTAACTGTAACCGACTCCGTAACTGTAACCGACTTGGTGGATCCCACCGTTCGGTTGATGTATTTAGCGAACGAAGGTGACTTAGAAGGAATCACCGAACTTCTAGACGACGGTAGTGACGTCAATTTCCGTGACACTGACGGCCGCTCCGCTCTTCATGTCGCCGCCTGTCAAGGCCGAACCGACGTTGTCGAATTGTTGCTTCAAAGAGGCGCTGAAGTTGATGTTCAAGATCGTTGGTGTAGCACTCCTCTTGCTGATGCGTTGTATTATAAGAATCATGATGTTGTTAAGCTTTTGGAGCAGCATGGTGCAAAACTGAAGGTGGCTCCTATGCATGTCCAGAATTCCCGTGAAGTCCCAGAATATGAGATTGATTCTTCTGAACTTGATTTTACAAATAGTGTTTGCATAACAAAGGGAACTTTCCGGAGTGCAATTTGGCGTGGAATTCAAGTAGCTGTTAAAACTCTTGAGGAGGATGTGTTCACCGATGATGATAAAGTAAAGGCATTTCACGATGAGCTTACATTACTTCAGAAAGTAAGGCATCCAAATGTTGTCCAATTTTTGGGTGCTGTGACACAAAGCACCCCAATGATGATTGTCACTGAGTATCTACCTCAGGGGGATCTTTGTGCCTACTTGAAGCGGAAAGGTGCACTAAAACCAATAATAGCTGTGAAGTTTGCACTTGATATTGCTAGGGGGATGAACTATTTGCATGAACATAAACCTGAAGCCATAATACACCGAGATCTTGAGCCTTCAAATATTCTCCGGGATGATTCTGGGCATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTCACTCAAAATCACTAAAACAGTCAAAGAAGACAAACCTGTGACATGCCAGGATACATCATGGCGGTATGTTGCACCAGAGGTCTACAGAAATGAGGAATATGACACCAAAGTGGATGCGTTTTCTTTTGCTCTGATATTACAAGAGATGATTGAAGGTTGTCCACCATTTTATAGAAAGCCAGAAAGTGAAGTTCCTAAAGCATATGTGGAAAATGAGCGTCCACCATTCAGGGCTTTGCCAAAACTTTATCCTTATGGATTAAAAGATTTAATTGAGGAATGTTGGGATGGAGAACCATACCGAAGACCAACGTTTAGGCAAATAATCGAGAGGTTGGATAAGATCAGCAACCATCTTGCTCAAAAGAGGTGTTGGAAGGCTCTGACTCCTCCATGCATCCGGAATCTGGAGACCTTGTTTAAGGGGTATCCTACAAGTCCTGGTAGCCGATCAGCTCGCTCTACAGTTAGATAA 1410 0.444 METKKLHSRFSLGRQSSLAPDHDGSATVNSLVTDSVTVTDSVTVTDLVDPTVRLMYLANEGDLEGITELLDDGSDVNFRDTDGRSALHVAACQGRTDVVELLLQRGAEVDVQDRWCSTPLADALYYKNHDVVKLLEQHGAKLKVAPMHVQNSREVPEYEIDSSELDFTNSVCITKGTFRSAIWRGIQVAVKTLEEDVFTDDDKVKAFHDELTLLQKVRHPNVVQFLGAVTQSTPMMIVTEYLPQGDLCAYLKRKGALKPIIAVKFALDIARGMNYLHEHKPEAIIHRDLEPSNILRDDSGHLKVADFGVSKSLKITKTVKEDKPVTCQDTSWRYVAPEVYRNEEYDTKVDAFSFALILQEMIEGCPPFYRKPESEVPKAYVENERPPFRALPKLYPYGLKDLIEECWDGEPYRRPTFRQIIERLDKISNHLAQKRCWKALTPPCIRNLETLFKGYPTSPGSRSARSTVR* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3241 469 SUPERFAMILY Ankyrin repeat 53 145 IPR036770 -
Mtr5g3241 469 Pfam Protein tyrosine and serine/threonine kinase 177 424 IPR001245 GO:0004672|GO:0006468
Mtr5g3241 469 Gene3D - 46 152 IPR036770 -
Mtr5g3241 469 MobiDBLite consensus disorder prediction 10 24 - -
Mtr5g3241 469 CDD STKc_MAP3K-like 173 424 - -
Mtr5g3241 469 ProSiteProfiles Ankyrin repeat region circular profile. 82 114 - -
Mtr5g3241 469 PIRSF ILK 2 446 - -
Mtr5g3241 469 SUPERFAMILY Protein kinase-like (PK-like) 172 424 IPR011009 -
Mtr5g3241 469 SMART ANK_2a 48 78 IPR002110 GO:0005515
Mtr5g3241 469 SMART ANK_2a 115 144 IPR002110 GO:0005515
Mtr5g3241 469 SMART ANK_2a 82 111 IPR002110 GO:0005515
Mtr5g3241 469 ProSiteProfiles Protein kinase domain profile. 167 427 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3241 469 Pfam Ankyrin repeats (3 copies) 54 143 IPR002110 GO:0005515
Mtr5g3241 469 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 10 451 - -
Mtr5g3241 469 MobiDBLite consensus disorder prediction 1 24 - -
Mtr5g3241 469 Gene3D Transferase(Phosphotransferase) domain 1 153 441 - -
Mtr5g3241 469 PANTHER INTEGRIN-LINKED KINASE FAMILY PROTEIN 10 451 - -
Mtr5g3241 469 ProSiteProfiles Ankyrin repeat profile. 82 114 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3241 Mtr-Chr5 41280502 41286896 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3241 1 438 MAP Kinase Kinase Kinase AT4G18950 64.384 0.0 567
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Mtr5g3241 PK_Tyr_Ser-Thr 3.9e-53 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3241 - - gmx:100795964 747.273
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3241 5 41280502 41286896 Mtr3g3556 3 49426431 49434349 PCT