Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3236 ATGTCTAAAGATATTATCTATATTCTTTCATGTGTTTTGTTTCCCCTGTTTGCTCTGTTCTCTTTCAATTTCTTGAGGCACAAGCAACAAAATAACAAAGACAAAAGAAAGCTTCCACCAGGTGAAATGGGATTTCCATTGATAGGAGAGACCATGGAATTCTTCAATGCTCAAAGGAGAAACAAATTGTATGAAGATTTTGTTCATCCTCGAATCACGAAACACGGAAAGATCTTCAAAACAAGGATCATAGGGTCACCAACTGTGATAGTAAATGGAGCTGAGGCAAATAAGTTTATTTTGTCCAATGAGTTCAAGCTGGTAAAAAGCTCTTGGCCTTCTTCCTCAGTTCATCTCATGGGAAAGGACTCTATCATGGAGAAAGACGGCGAAAGACACCGCTTCCTACGAGGCGTTATCGGCACTAGTTTTGGCTATGCTGGACTAGAAACATTAGTTCCAAAGTTATGCAACTTTGTTAAATTGTATTTATCTAAAAACTGGCAAGGTCAAGAAGAGATTAGTCTCTACCGCTCGACGAAAGTTCTTACATTTAGCATTGTTTTCGAGTGTTTGTTAGGGATCAATGTGGAACCAGGTATGGTAGATACTTTTGAGAGAGTGTTGGAAGGAGTTTTCTCACCAGCAATTAAGTTTCCAGGTTCTAAATTTTGGAGAGCAATGAAAGCTAGAAAGGAGATAGAAAAGATGATAGTGAAAGTGGTGAGAGAGAAGAGAAAGGAAATTGAAGAAGGAAAGTTGAAAAGAGAGGAAGATAGAATGTTAATGTCTAAATTGGTATATGGAATGATCCAAGGGGAGATTACTGAAAAAGAGATTATAGATAATGTGGTTTTGCTAGTTTTTGCAGCTCATGATACTACTTCTTTTGCTGTTGCTATGACATTCAAGATGCTGGCTCAACATCCTCATTGCTATGGTAAAGTTCTACAAGAACATGTTGATATAATGAATGACAAAAGAAGGGGTGAGAGTCTAAATGTAGAAGACATAAAGAAGATGAAGTATACATGGCAAGTTGCTAGAGAAAGCATGAGACTGTTCCCACCAATATTTGGTTCTTTCAGAAAGGCAATTACTGATATTGAATATGAAGGATTCACTATACCTAAAGGATGGAAGGTGTTATGGACAACATATGGGACACATTACAATGAAGAGTATTTTAAGGATCCTACAAGTTTCAAGCCAAGTAGGTTTGAGGAGGGAATAGCACAATATGCATTTGTTCCCTTTGGAGGAGGGCCAAGAGTGTGTGCAGGGTACCAATTAGCCAAACTAAATATTCTTATACTTGTGCATTATGTTGTGACACAATATGAGTGGTCCTTACTACATCCAGATGAAACAGTAACAATGGATCCTCTACCCTTCCCTTCCCTTGGAATGCCCATTAGAATTTCCCCTAAGCATATTTAA 1440 0.3792 MSKDIIYILSCVLFPLFALFSFNFLRHKQQNNKDKRKLPPGEMGFPLIGETMEFFNAQRRNKLYEDFVHPRITKHGKIFKTRIIGSPTVIVNGAEANKFILSNEFKLVKSSWPSSSVHLMGKDSIMEKDGERHRFLRGVIGTSFGYAGLETLVPKLCNFVKLYLSKNWQGQEEISLYRSTKVLTFSIVFECLLGINVEPGMVDTFERVLEGVFSPAIKFPGSKFWRAMKARKEIEKMIVKVVREKRKEIEEGKLKREEDRMLMSKLVYGMIQGEITEKEIIDNVVLLVFAAHDTTSFAVAMTFKMLAQHPHCYGKVLQEHVDIMNDKRRGESLNVEDIKKMKYTWQVARESMRLFPPIFGSFRKAITDIEYEGFTIPKGWKVLWTTYGTHYNEEYFKDPTSFKPSRFEEGIAQYAFVPFGGGPRVCAGYQLAKLNILILVHYVVTQYEWSLLHPDETVTMDPLPFPSLGMPIRISPKHI* 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3236 479 Gene3D Cytochrome P450 27 477 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS E-class P450 group I signature 72 91 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS E-class P450 group I signature 279 296 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS E-class P450 group I signature 299 325 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS E-class P450 group I signature 385 409 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS E-class P450 group I signature 416 426 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS E-class P450 group I signature 426 449 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS P450 superfamily signature 290 307 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS P450 superfamily signature 346 357 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS P450 superfamily signature 417 426 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 PRINTS P450 superfamily signature 426 437 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 SUPERFAMILY Cytochrome P450 35 476 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 Pfam Cytochrome P450 39 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Mtr5g3236 479 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 419 428 IPR017972 GO:0005506|GO:0016705
Mtr5g3236 479 PANTHER CYTOCHROME P450 26 17 476 - -
Mtr5g3236 479 PANTHER TAXADIENE 5-ALPHA HYDROXYLASE 17 476 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3236 Mtr-Chr5 41230003 41231835 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3236 7 382 Cytochrome P450 AT2G42850 60.677 1.48e-155 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3236 - - gmx:100793336 775.778