Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3232 ATGGAAGAAGAAAACATGGAAGAAGAGAGAAACAGAATCATACCAACATTTATCAACAAAAACATGAACACTACTACTACTCAAGGTGTTCAAAAGTCTCTGCATGTTTTACGGCGAAGCCGAAGACGGTGCACAGAAGGTGGTGGTGGCAGCAAGGAAAAGATGTTGATAAAAGAAGTTGCTATGAATGATTGTGCTGTTGAGGAGAAAGAAAAGGAAGAAAAAGAAGATGAAGAAGAAGGTAGTGATGATAGAGAAGAAGTAGAGAGAAAGATTCATGCATTGCAGAGGATTGTACCTAATGGTGAGTCTTTTGGTGTGGACAAGCTTTTTGATGAAACTGCTGGCTATATTGTTGCTTTACAGTATCAAGTCAAAGCATTGAAAGCTCTTACTGGTTTCTTTGAAAAGTTGGAGAAGGACAAGACTAAACTTGGAGGTTGA 444 0.3874 MEEENMEEERNRIIPTFINKNMNTTTTQGVQKSLHVLRRSRRRCTEGGGGSKEKMLIKEVAMNDCAVEEKEKEEKEDEEEGSDDREEVERKIHALQRIVPNGESFGVDKLFDETAGYIVALQYQVKALKALTGFFEKLEKDKTKLGG* 148
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3232 147 Coils Coil 58 78 - -
Mtr5g3232 147 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 5 145 IPR044660 GO:0006355
Mtr5g3232 147 MobiDBLite consensus disorder prediction 22 53 - -
Mtr5g3232 147 PANTHER TRANSCRIPTION FACTOR PAR1 5 145 - -
Mtr5g3232 147 MobiDBLite consensus disorder prediction 66 89 - -
Mtr5g3232 147 CDD bHLH_AtIBH1_like 88 132 IPR044549 GO:0006355
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3232 88 128 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G09250 46.341 4.22e-06 42.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3232 - - mtr:MTR_5g091690 258.455