Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3191 ATGGAGGTGGCAAAATTAGATAACTTTGATGACAAGAAAGAAGATGAAGTTGTGCTTCCTGGGTTTAGATTCCACCCAACAGATGACGAGCTTGTCGGATTTTATCTACGGCGAAAAGTGGAGAAGAAGCCTCTTCGAATTGAACTCATCAAAGAGATTGACATATACAAATATGATCCATGGGATCTACCAAAAGCTAGTACTGTGGGGGAGAAGGAATGCTATTTCTTTTGTTTAAGAGGAAGAAAATATAGGAACAGCATAAGGCCTAATAGAGTGACAGGATCTGGATTTTGGAAAGCTACGGGGATTGATAAACCTATATATTGTGTTAAAGAATCACATGAATGCATTGGACTCAAGAAATCATTGGTTTATTACCGTGGAAGTGCAGGGAAAGGCACCAAAACTGATTGGATGATGCATGAATTTCGTCTACCACCTAAAGGAAAAACTAGCAATAATCAAGTTCTTAACCATACCAATGATGTTCAAGAAGCTGAAGTGTGGACACTATGCAGAATATTCAAACGAATTCCATCATACAAAAAATACACACCAAATGTGAAAAAAGACTCGGAAGCAGCAGCATTCACTATTAACTCTTCAAGTTCCAAAACATGCAGCTTAGATTCAGACAACACCAAACCACAATACTTGACTTTCACAAACTCACAACATGTTGTTCAACAGAATCATGAAACCAAACCATTCATTAATGGACATGTTGTTGACCAAAGATTTAACAACTCATTTCTAAATCAATTAGGCAATGCAGCACAAGTTCCAACAACAACCTTGTCTCACTCAAGTTTTTGGAATGATCAAAATGTTTTGGATGATGCATTTGCAAATGAGAATTGGGATGATCTTAGATCTATTGTTCAGTTTACCTTTGATCCATCAAAGGTTTATGATTGTAAAGATTTTAATTAG 936 0.3654 MEVAKLDNFDDKKEDEVVLPGFRFHPTDDELVGFYLRRKVEKKPLRIELIKEIDIYKYDPWDLPKASTVGEKECYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDKPIYCVKESHECIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPKGKTSNNQVLNHTNDVQEAEVWTLCRIFKRIPSYKKYTPNVKKDSEAAAFTINSSSSKTCSLDSDNTKPQYLTFTNSQHVVQQNHETKPFINGHVVDQRFNNSFLNQLGNAAQVPTTTLSHSSFWNDQNVLDDAFANENWDDLRSIVQFTFDPSKVYDCKDFN* 312
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3191 311 ProSiteProfiles NAC domain profile. 18 178 IPR003441 GO:0003677|GO:0006355
Mtr5g3191 311 SUPERFAMILY NAC domain 16 177 IPR036093 GO:0003677|GO:0006355
Mtr5g3191 311 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 6 308 - -
Mtr5g3191 311 Gene3D NAC domain 27 181 IPR036093 GO:0003677|GO:0006355
Mtr5g3191 311 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
Mtr5g3191 311 PANTHER - 6 308 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3191 Mtr-Chr5 40816156 40819809 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3191 12 178 NAC Transcription Factor Family AT5G39820 61.453 1.86e-75 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Mtr5g3191 NAM 5.7e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3191 - - gsj:114384349 457.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3191 5 40816156 40819809 Mtr5g3191 5 40816156 40819809 ECH