Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3190 ATGTCTATTGAAAAATATGGAGAACACTCGAGTGGTTTCACCTATGATGTTTTCCTAAGTTTTAGAGGAGAAGATGTGCGGCACAATTTTATTGGTTATCTTCGCGATGCATTGCAGCATCGGGGAATCAATGCTTTCTTTGATGACAAGAATCTGAGAATAGGGGAAGACATTTCACCTGCACTTTCAAAAGCCATTGAAGAATCTAAGATCGCAGTTATTGTTTTTTCTGAGAATTATGCATCTTCCAGGTGGTGCCTTGGCGAACTCGTTAAGATAATCGAATGTACGAAAAGAAACAAAAAACAAATTTCTTTTCCAATCTTTTTCCATGTTGATCCATCAGATGTAAGACATCAGAAAAATAGTTACGAGAAAGCCATGGTTGATCATGAGGTTAAGTTTGGAAAAGACTCTGAAAATGTAAAAGCATGGATAACAGCATTGTCTGAAGCAGCAGACTTGAAAGGCCACCATATCAATACCGGATCCGAAATTGACCACATTAAAGAGATTGTTGAAAAGGTCCATGCTAACATTGCTCCTAAACCTTTGCTTTATGGTGATGATCCAGTTGGACTTGAACATCATACAGAAAATGTGATGTCACGTCTAGACAATACTGATCATACAGTAATGTTGGGTATACATGGACTTGGTGGAATAGGGAAAACAGAACTTGCCAAATCATTGTATAACAAAATTGTGCACCAATTTGAAGCTGCAAGTTTTCTTGCCAACGTTAGAGAGAAATCAAACAAAATCAATGGCCTAGAAGATCTTCAAAAGACACTTTTATCAGAGATGTTTGAGAAGCCAGATACCGATCTGGGAAGTACAAGTAAAGGAATCAAAGAAATAAAGCAAAAGCTGGGCAATAAAAAGGTTCTTTTGGTTCTTGATGACGTTGATAACAAAGAACAATTAAAAAATTTGGCAGGAGGAAGTGATTGGTTTGGCCCAGGTAGTAGGATCATTATAACTACAAGGGACAAAGGTTTGCTCATAGGTACTCATTCTTTTGTTGTTCAAAAGATTTATGAAATGACTGAACTTAATGAGAAAGATTCTCTTGAGTTGTTTTGTCGGAATGCCTTTGGAAAGAGCCATCCTGAAACAGGCTATGAAGCTGTGTCTTCTCGTGCGGTTGGATATGCCAAGGGTCTTCCATTGGCTTTAAAAGTAATAGGTTCTAATTTGGGTGGTGGAAAGAGTTTAAGAGCTTGGGAAGATGCATTGAAAAATTACGACAGGATTCCACGTAGAGGAATTCAAGAGGTGCTCCAAGTAAGCTACAATGTGTTGGAGCCCAATGCCCAGAGTGTTTTCCTAGATATAGCATGCTTCTTCAAAGGGGATAGAGTAGATTATGTTGAAGAGATACTTGATGACTTCGCTGCAGTAACTGGTATTGAAGAACTTGTTAATAAATCTCTCTTAATAGTTAAAGATGGCTGCTTGGATATGCATGATCTAATACAAGAGATGGGCAGAGATATTGTCAAGCAAGAGTCGCCACGAAATCCCGCCAAACGTAGTAGATTATGGTCTCATAAAGATATTATTAAAGTATTATCAAATGAAAAATATGGAAGTGATGTACTTCAAGGGATAATGCTTGATCCTCCCCAACCTATAAAACAACAAGATTGGAGTGATACTGCCTTTGAGCAGATGAATTGCCTCAGAATTCTCATTGTTCGAAATACAACATTTTCATCGGAGCCTAAACATCTACCAGATAATTTAACTCTGCTTGATTGGGAGGAGTACCCTTCAAAGTCATTTCCCGCAATGTTTCATCCAGAGGAAATCATCGTCTTCAATTTGCCTGAAAGCAAACTTACACTGGAAGAGCCATTTAAGGTATTTTCAAAATTGACTATCATGAATTTCTCAAAAAATGAATCTATCACCGTAATTCCCGATGTTTCAGGAGTCGAAAATTTGAGAGTACTTAGACTTGATAATTGCACTAACCTAATTATGGTTCATGAATCCGTTGGGTTTCTCGAACACCTTACTCACTTCAGCGCTTCAGGATGCGCCAAACTTCGAAATTTCCAGCAAAAAATGTTTTTACCATCCCTTGAATTCCTTGACCTTAACTTATGTGTTGAACTTGAACACTTCCCAGATATACTGAACAAGATGAATAAGCCATTGAAGATTTATATGATAAATACTGCAATTGAGGAGTTGCCAGATTCCATTGGTAATCTTATCGGGCTTGTTTCTATCGAGATGACAAGTAGTTGGAAGCTCAAATATATACCATGTAGCTTATTCACACTACCAAATGCTGTCACCTTTAAATTTGGAGGATGTTCTCAACTTGCCTTGAGAAGATTTCTACATGATATCCCTTCAGCAGCCAATGGTCGTTCAACATTAAAAGCATTGCATTTTGGAAATAGTGGTTTGTCTGATGAAGATCTTAAGGCAATTCTTATCTCTTTTCTTGAATTACAAGAGTTGATTGCATCTGACAATAATTTTGTCTCTCTCCCTGTGTGCATTAAAGACTCTGCTCACTTGACAAAGCTTGATGTCAGTGGTTGCAATATGCTTCGAGAAATTCCTGTATGCATCAACTTAAGAATTCTGAATGTTTACGGTTGTGTGATGCTTGAACACATATCAGAGTTGCCATGCACTATTCAAAAAGTAGATGCAAGATACTGCATCCGCTTGAATAGAGAGACGTCGGAGATGTTATGGTATCAGGTGAAAAGCGAGAGACGTGGATTACAGATTGTGATGCCTCAAAAGAAAACTGGGGTTCCAAATTGGTTTGACTACAGCTGCAAAGGAGGGAATCCGCGGTTTTGGGTTCGTAAGAAGTTCCCCAATGTTGCTTTAGCATTGGTATTCGAGGGAGTGACCGGGAGGGCCAGAAAATCTCGTCGGCTACTTGTTGAGCTTCACTTGGTTATAAATGGTCTCTGTGTCCGCCGTAAAGGTTATTACAACTTCAGAATTGAACAAAATCATGTGTTAGTTTGTGATTTGCAACTATTGTTCAGTGATGAGGAGTGGCTGGGCCTTGATGCATTACTTCTTGAGGATGAGTGGAATCAAGTGCAGGTTTCATATGAAGCCCCGTCTAGTGTGACACTAAGTGATTGGGGAGTATTTGTGTACAAGCAAGGAACCAACATGGAAGAATATGTCCAATTCATGTGTCCCGACCTAAAGTACTCACAGCTGGTAACTGACATATCACCCACAATGACAATAGTTCCTCCAAAAGATGATAAGCTAGAACAGATGAAGTTGATAGATCAGTTAGCTCTAGATGAAATGTTACCTGGGATGTTGAGGGAAACTAGGGACATGGAAGGCCGCAGTTCAAATGAAGGAAATTTACAAGACCTAATGGCGATTGTGAGTGGCCTAAATAAGGAGGTTCAAGATGCATTAGAAGGTAAACCGCTGGATAAAAAGTCCCCCCTGGCATGGATTCTTCAGATAGTCAATGAATCAAATGATGATAATGATGAGCAAGCAAACTTTGATCATACAGATGAAATGAAACCCGCCATAGGTGTAGGAGAAGCTTCAACCTCTGGCCACCAGGGAAGGTCAGAGGCCCAAGACAGCAACGCTGAGCAGGATGGAATAATGACAGGGATATTCTTGAATGGAATGGGAACGGGACTTCGTGAAGCACAGGGTATCTTTCCTCCTCTAGATATAGACACTATCATGATTGCTGCCTTAAATAGAGGTGAATGGATTAGATTGTCACTCCCAGAGTCTGAGGCCGAAATGACGATATACATGGAAGGAATTATCAATGGACTGCTGGAAGCAAAGCTGAGCTTTCCTACTCTGAAAGAGTGGGAAATACTAAATACCGTGTTAAGGAAGGAAGGCCATAATACGATGTTTCAACAAATAGATTGGACTGGAATAGTGATTCCAAGCTATGAAGATCCTTTGTTGCAAACATTCATGATGATGAAGCAAGGAAGTTGTGAATCGGAGAGGGCCAAGAGTAAACTCTTCTGCAAGTTGCTGGAGGAACAAAATGCTCTGCGCAAGAAATTTGAAGAAATTGATAATGAAATTGCTACTATGGATAATTCAAAGAAGGGTCACATCCTTAATGAGAAGCTGGCTGATGTTTTGAAAGGAAGAGCTGAAGAATTGCAGAGGTTCTATGATGCTGGTATTGAAGGCTTCAAGAACTCAAAAGAGATTCAAGATCTTATGACAGCTACATACTCAAATGGAATGAGGAATGGTGTCCTTGAAGCACGGGCCATATTACTTGCTCTGGACATGGACATAATAACTCACGTGTTTGAGGGGAATGAAAATGAAATTTCTGCTCAGGATAAAGATAGTCGCCTTCTTCCTTCTTCAGAAAATCAATATTACAATTTTGTGGAGAAGCTTAACACTCAATTTGCCTGGTATAGTTCAAATAAGGATCAGAGCCCTGATGACTGCCACACAAAGGAATCAAGCATTTCTGACTCAAAATCTTCTTTGGGTAGCACAAAGATTTGTGCAAACATTGGAAAAGAAAGTTGCAAAGATGTTATAAAGCATAAGAAGCTGGCTGCTGTCTTAAAAGAAAGAGGAGAAGAATTGACGAGTCTCTATGATGCTGAAATTGAACAATTACAGAACTCAGAAGAGATTCAAGATCTAATGAGTGCCATCTACTTGAGTGGACTGAAGGATGGAGTCCTTGAAGCACAGGCCACCTTACTTTCTTTGAACATGGACAAACCAACTCCTATGTTTGAGGAGAATGAGGAACATATTACTCATATGGCTTCCAATGATGAAGCTGTTATTGAAAATGACGATGATAAGACTATTGGCAAAGAGGATAATCCTAGTCCTACTGGTCCAGAAGTTGACAAAACTAGGGACACTCCTTACCCCTATGGTTGCTTCTGGAGGATTTTGCACACTTATTTTTGCAAGTGTTTTTCTTAG 4956 0.3943 MSIEKYGEHSSGFTYDVFLSFRGEDVRHNFIGYLRDALQHRGINAFFDDKNLRIGEDISPALSKAIEESKIAVIVFSENYASSRWCLGELVKIIECTKRNKKQISFPIFFHVDPSDVRHQKNSYEKAMVDHEVKFGKDSENVKAWITALSEAADLKGHHINTGSEIDHIKEIVEKVHANIAPKPLLYGDDPVGLEHHTENVMSRLDNTDHTVMLGIHGLGGIGKTELAKSLYNKIVHQFEAASFLANVREKSNKINGLEDLQKTLLSEMFEKPDTDLGSTSKGIKEIKQKLGNKKVLLVLDDVDNKEQLKNLAGGSDWFGPGSRIIITTRDKGLLIGTHSFVVQKIYEMTELNEKDSLELFCRNAFGKSHPETGYEAVSSRAVGYAKGLPLALKVIGSNLGGGKSLRAWEDALKNYDRIPRRGIQEVLQVSYNVLEPNAQSVFLDIACFFKGDRVDYVEEILDDFAAVTGIEELVNKSLLIVKDGCLDMHDLIQEMGRDIVKQESPRNPAKRSRLWSHKDIIKVLSNEKYGSDVLQGIMLDPPQPIKQQDWSDTAFEQMNCLRILIVRNTTFSSEPKHLPDNLTLLDWEEYPSKSFPAMFHPEEIIVFNLPESKLTLEEPFKVFSKLTIMNFSKNESITVIPDVSGVENLRVLRLDNCTNLIMVHESVGFLEHLTHFSASGCAKLRNFQQKMFLPSLEFLDLNLCVELEHFPDILNKMNKPLKIYMINTAIEELPDSIGNLIGLVSIEMTSSWKLKYIPCSLFTLPNAVTFKFGGCSQLALRRFLHDIPSAANGRSTLKALHFGNSGLSDEDLKAILISFLELQELIASDNNFVSLPVCIKDSAHLTKLDVSGCNMLREIPVCINLRILNVYGCVMLEHISELPCTIQKVDARYCIRLNRETSEMLWYQVKSERRGLQIVMPQKKTGVPNWFDYSCKGGNPRFWVRKKFPNVALALVFEGVTGRARKSRRLLVELHLVINGLCVRRKGYYNFRIEQNHVLVCDLQLLFSDEEWLGLDALLLEDEWNQVQVSYEAPSSVTLSDWGVFVYKQGTNMEEYVQFMCPDLKYSQLVTDISPTMTIVPPKDDKLEQMKLIDQLALDEMLPGMLRETRDMEGRSSNEGNLQDLMAIVSGLNKEVQDALEGKPLDKKSPLAWILQIVNESNDDNDEQANFDHTDEMKPAIGVGEASTSGHQGRSEAQDSNAEQDGIMTGIFLNGMGTGLREAQGIFPPLDIDTIMIAALNRGEWIRLSLPESEAEMTIYMEGIINGLLEAKLSFPTLKEWEILNTVLRKEGHNTMFQQIDWTGIVIPSYEDPLLQTFMMMKQGSCESERAKSKLFCKLLEEQNALRKKFEEIDNEIATMDNSKKGHILNEKLADVLKGRAEELQRFYDAGIEGFKNSKEIQDLMTATYSNGMRNGVLEARAILLALDMDIITHVFEGNENEISAQDKDSRLLPSSENQYYNFVEKLNTQFAWYSSNKDQSPDDCHTKESSISDSKSSLGSTKICANIGKESCKDVIKHKKLAAVLKERGEELTSLYDAEIEQLQNSEEIQDLMSAIYLSGLKDGVLEAQATLLSLNMDKPTPMFEENEEHITHMASNDEAVIENDDDKTIGKEDNPSPTGPEVDKTRDTPYPYGCFWRILHTYFCKCFS* 1652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3190 1651 ProSiteProfiles TIR domain profile. 13 184 IPR000157 GO:0007165
Mtr5g3190 1651 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 157 IPR035897 -
Mtr5g3190 1651 MobiDBLite consensus disorder prediction 1609 1628 - -
Mtr5g3190 1651 MobiDBLite consensus disorder prediction 1609 1623 - -
Mtr5g3190 1651 SUPERFAMILY L domain-like 489 882 - -
Mtr5g3190 1651 Pfam TIR domain 15 176 IPR000157 GO:0007165
Mtr5g3190 1651 Gene3D - 351 436 IPR042197 -
Mtr5g3190 1651 MobiDBLite consensus disorder prediction 1189 1205 - -
Mtr5g3190 1651 Pfam NB-ARC domain 195 435 IPR002182 GO:0043531
Mtr5g3190 1651 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 22 1078 IPR044974 GO:0006952
Mtr5g3190 1651 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 184 446 IPR027417 -
Mtr5g3190 1651 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 22 1078 - -
Mtr5g3190 1651 Gene3D Ribonuclease Inhibitor 550 723 IPR032675 -
Mtr5g3190 1651 Gene3D Ribonuclease Inhibitor 724 914 IPR032675 -
Mtr5g3190 1651 PRINTS Disease resistance protein signature 213 228 - -
Mtr5g3190 1651 PRINTS Disease resistance protein signature 290 304 - -
Mtr5g3190 1651 PRINTS Disease resistance protein signature 386 400 - -
Mtr5g3190 1651 PRINTS Disease resistance protein signature 692 708 - -
Mtr5g3190 1651 SMART till_3 14 155 IPR000157 GO:0007165
Mtr5g3190 1651 Gene3D - 9 180 IPR035897 -
Mtr5g3190 1651 MobiDBLite consensus disorder prediction 1182 1205 - -
Mtr5g3190 1651 Gene3D - 181 341 IPR027417 -
Mtr5g3190 1651 MobiDBLite consensus disorder prediction 1479 1501 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3190 Mtr-Chr5 40802616 40808873 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3190 6 849 WRKY Transcription Factor Family AT4G12020 29.897 8.99e-83 300
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3190 - - mtr:MTR_5g090940 3308.08