Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3186 ATGAATATTGGAAAAGTAGAATTCAGTGTCAATATTACTAACGAGGAGGTAGTTGCAGCTACCAAAGCAATGCAAGAACATAGGCTAGCACTATCAAATCTTGATTTACTACTTCCCCCTGTTAGTATTGGTGTGTTCTTTTGCTACAAAAATCCTATGATTACTATTGGCACCACCAATAACACTATTGTGGGGTGCTTGAAAAATTCCTTAGCTGAAGCTCTTGTTTCTTACTACGTATTTGCTGGTGAAATGGTTACTAACTCCATGGGTGAACCTGAGCTACTTTGCAATAACCGTGGTGTGGATTTTGTTGAAGCTGTTGCTGATGTTGAGTTGCAATCTCTCGATTTGTATAAGCCAGAGGAAACCATTGAAGGGAAGCTTGTTCCAAAGAAGAAATATGGTGTACTTGCTGTTCAGGCAACTTGGATGAAATGTGGTGGGTTAGTAGTGGCGTGCAATTTTGACCATCGAATAGCCGACGCCTATTCTGCAAACATGTTTCTTGTATCATGGGCCGAGATAGCCCGATCGAGCAATAACAAGTCTTTGATCCCAACAACACAACCTTGTTTTCAAAGGTCCCTTCTGACCCCAAGACACCCACCTTCCATCCATCCTTCACTCTATGACATGTACATCCCCATCTCGGATCTACCTCCACCACCTGAATCCAAGCCCGAATTAGATATTAAAACCAACCCACTAATAAGTCGCATGTACTACGTAACAAGCGAAGAACTCAACACCATGCAGTTACTAGCCAACACAAATAATAGTGGAAGCGTTAAGCGCTCAAAACTTGAATCGTTTTCTGCTTTCTTGTGGAAAATGGTTGCATCAGCCGCTTCAACCAATAGTGAAAATGTTGTTGCAAAAATGGGGATTGTGGTTGACGGAAGAAAGAGATTAAGCAACGGTGACAAAAACAAAGAAGAGTTTATGAGTTCGTATTTTGGGAATGTGCTTTCAACTCCCTATAGTTGTAGATTAATAGAAGAACTTGTTGAAAAGTCGTTATGTTGGGTGACAGAGCAAGTTCATGAGTTTGTGGAGGTTGCGGACACGGAAGAACATTTCTTGGGACTAATTGATTGGGTGGAAGAGCATCGACCGGTTCCGGGATTGGCAAGGATTTATTGCGGAGTAACTGGTGGAGCAGATGGACCGACATTTGTGGTGTCTTCTGGGCAAAGGTTTTCAGAGTCGAAGGTAGATTTCGGATGGGGGAAGCCCGTGGTTGGATCTTATCATATTCCTTGTGGTGGTGATGCGGGCTACGTTATGCCAATGCCTAGTCCTAAAAGGAATGGTGATTGGTTGCTCTACATGAATCTTCCTAAGGAATACTTGCATTTCATGGTGGCTGAAGCTCCCCATTTCTTTAGACCAATCTCATGGGATTATCTTCTCAATTAA 1422 0.4255 MNIGKVEFSVNITNEEVVAATKAMQEHRLALSNLDLLLPPVSIGVFFCYKNPMITIGTTNNTIVGCLKNSLAEALVSYYVFAGEMVTNSMGEPELLCNNRGVDFVEAVADVELQSLDLYKPEETIEGKLVPKKKYGVLAVQATWMKCGGLVVACNFDHRIADAYSANMFLVSWAEIARSSNNKSLIPTTQPCFQRSLLTPRHPPSIHPSLYDMYIPISDLPPPPESKPELDIKTNPLISRMYYVTSEELNTMQLLANTNNSGSVKRSKLESFSAFLWKMVASAASTNSENVVAKMGIVVDGRKRLSNGDKNKEEFMSSYFGNVLSTPYSCRLIEELVEKSLCWVTEQVHEFVEVADTEEHFLGLIDWVEEHRPVPGLARIYCGVTGGADGPTFVVSSGQRFSESKVDFGWGKPVVGSYHIPCGGDAGYVMPMPSPKRNGDWLLYMNLPKEYLHFMVAEAPHFFRPISWDYLLN* 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3186 473 Gene3D - 7 212 IPR023213 -
Mtr5g3186 473 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 467 - -
Mtr5g3186 473 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 467 - -
Mtr5g3186 473 Pfam Transferase family 9 458 - -
Mtr5g3186 473 Gene3D - 224 455 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3186 Mtr-Chr5 40769508 40771412 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3186 10 452 Monolignol Biosynthesis Gene Families AT5G48930 26.464 5.88e-35 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3186 - - cam:101501659 724.161