Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3185 ATGGTTGCTCATGAGAATAGGTTCGGAAAAGATTCAGAAAATATAAAAGCATGTAAAGCAGCATTGTCTGAAGCTGCAGACTTGAAAGCCAGAAACCGAGCTGGGAAGATAAGTAAAGGAATCTATGAAATAAAATACAAGCTTGGAAGGAAAAAGGTTCTGTTGGTTCTTGATGATGTTGATGAGATGGAACAAATAGGAAATTTGGCAGGAGGAAGTGATTGGTTTGGTCCAGGTAGTACGGTCATTATAACTACAAGGGACAAAGGTTTGCTTGTAGGTACTCATTCTTTTGTAGTTCAAAGTATTTATGAAATGACTGAACTTAGTGATCAACATTCTCTTGAGTTGTTTTGTCGAAATGCCTTTGGAAAAAGCAATCCTGAAACAGGATATGAAGCCACGTCTTCTCGTGCGGTTGGTTATGCAAAAGGTCTTCCATTGGCTTTAAAAGTAATAGGCTCCAATTTGGCTACTAGAAAAAGTTTAAAAGCTTGGGAGCATGCGTTGAAAGATTATGAGAGGATTCCTCGTAAAGGGATTCAAGATGTGCTAAAAGTAAGCTATGATGTGTTGCAGCCGTATGCTCAGAGTGTTTTCCTAGATATAGCTTGCTGCTTCAAAGGGGGAAGAATAGAATATTTTGAAGAGATACTAGCTTGA 663 0.3846 MVAHENRFGKDSENIKACKAALSEAADLKARNRAGKISKGIYEIKYKLGRKKVLLVLDDVDEMEQIGNLAGGSDWFGPGSTVIITTRDKGLLVGTHSFVVQSIYEMTELSDQHSLELFCRNAFGKSNPETGYEATSSRAVGYAKGLPLALKVIGSNLATRKSLKAWEHALKDYERIPRKGIQDVLKVSYDVLQPYAQSVFLDIACCFKGGRIEYFEEILA* 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3185 220 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 36 203 IPR027417 -
Mtr5g3185 220 Pfam NB-ARC domain 42 193 IPR002182 GO:0043531
Mtr5g3185 220 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 34 219 IPR044974 GO:0006952
Mtr5g3185 220 PRINTS Disease resistance protein signature 47 61 - -
Mtr5g3185 220 PRINTS Disease resistance protein signature 143 157 - -
Mtr5g3185 220 Gene3D - 108 193 IPR042197 -
Mtr5g3185 220 Gene3D - 3 99 IPR027417 -
Mtr5g3185 220 PANTHER ARCHAEAL ATPASE 34 219 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3185 Mtr-Chr5 40764668 40765939 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3185 34 219 WRKY Transcription Factor Family AT5G45050 34.409 3.43e-28 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3185 - - mtr:MTR_5g090870 381.333