Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3183 ATGTGTATTGGAAAAGGAGAATTCACCGTGAAAGTTACCAACAAAGAAATAGTGGCTGCTGCTCTGCCAATGCAAGAGCACTGGCTTCCACTATCAAACCTTGATTTAATTCTTCCCCCAGTTGATGTTGGTGTGTTCTTCTGTTACAAAAATCCTATAATTACTACTGCCACCCACCATAGCATTGTGGGATGTTTGAAAAATTCTTTAACTGAGGCTCTTGTTTCTTATTATGCCTTTGCTGGTGAAGTGATGACTAACTCCATGGGTGAACCTGAGTTACTTTGCAACAATCGTGGAGTGGATTTTGTTGAAGCTTTTGCTGATGTTGAGTTACAATCTCTCAATTTGTATAATCCAGATGAAACTGTTGAAGGGAAGCTTGTTCCAAAGAAGAAACATGGTGTGCTTGCTGCTCAGACAACATGGATGAAATGTGGTGGATTAGTAGTGGCTTGCACTTTTGACCATCGTATAGCGGACGCATATTCTGCAAACATGTTCCTTGTATCATGGGCCGAGATAGCTCGACCCAACAATAACAAGTCTTTGATCCCAACAATGCAACCTTGTTTTAGACGGTCACTTATGACCCCACGACGCCCACCTTCCATACATCCTTCACTTTATGACATGTATGTCCCCATCTCTGATATGCCTCCACCACCTCAACTTGAATCTGATCAAAAAACTGACCCAATAATAAGTCGCATATATTATGTAACAAGCAAAGAACTCAACAACATGCAGTCACTTGCCAACTCAAACAATAATGGTGGTAGTTCCAAACGCTCAAAACTCGAGTCCTTTTCTGCTTTCTTGTGGAAAATGGTTGCCGAAGCGGCTTCAATCAATAATGAAAATATTGTTGCAAAAATGGGGCTTGTGGTTGACGGAAGAAAGAGGCTAAGCAACGGTGACAAAAACAAAGAAGAGCTTATGAATTCATATTTTGGGAATGTGCTTTCGATTCCCTATGGTGGTAGATTAGCAGAAGAGCTGGTTGATAATCCGCTATGTTGGGTGGCTGATCGAGTTCATGAGTTTTTGGAGGCAGCAGTGACAGAGGAGCATTTCTTGGGTCTAATTGATTGGGTGGAAGAGCATCGACCAGTTCCTGGATTGGCTAGGATTTATTGTGGCAGCACTGGTGGAGAAGAAGGACCAACATTTGTGGTATCTTCAGGGCAGAGGTTTCCAGAGTCGAAGGTTGATTTTGGATGGGGGAAGCCTGTGTTTGGATCTTATCATTTTCCTTGGGGAGGTAGTGCTGGCTATGTTATGCCAATGCCAAGCCCTAAAAGGAATGGTGATTGGTTGCTCTACATGCACCTTCCTAAGGGACACTTGCACTTCATGGAGGTCCAAGCCCCTCATTTCTTTAGACCAGTCTCTTGGGATTACCTCCTTAATTAA 1416 0.4294 MCIGKGEFTVKVTNKEIVAAALPMQEHWLPLSNLDLILPPVDVGVFFCYKNPIITTATHHSIVGCLKNSLTEALVSYYAFAGEVMTNSMGEPELLCNNRGVDFVEAFADVELQSLNLYNPDETVEGKLVPKKKHGVLAAQTTWMKCGGLVVACTFDHRIADAYSANMFLVSWAEIARPNNNKSLIPTMQPCFRRSLMTPRRPPSIHPSLYDMYVPISDMPPPPQLESDQKTDPIISRIYYVTSKELNNMQSLANSNNNGGSSKRSKLESFSAFLWKMVAEAASINNENIVAKMGLVVDGRKRLSNGDKNKEELMNSYFGNVLSIPYGGRLAEELVDNPLCWVADRVHEFLEAAVTEEHFLGLIDWVEEHRPVPGLARIYCGSTGGEEGPTFVVSSGQRFPESKVDFGWGKPVFGSYHFPWGGSAGYVMPMPSPKRNGDWLLYMHLPKGHLHFMEVQAPHFFRPVSWDYLLN* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3183 471 PANTHER HXXXD-TYPE ACYL-TRANSFERASE FAMILY PROTEIN 8 465 - -
Mtr5g3183 471 Gene3D - 218 455 IPR023213 -
Mtr5g3183 471 Gene3D - 7 211 IPR023213 -
Mtr5g3183 471 Pfam Transferase family 9 455 - -
Mtr5g3183 471 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 8 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3183 Mtr-Chr5 40726607 40738284 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3183 19 454 Monolignol Biosynthesis Gene Families AT5G48930 26.292 1.31e-38 143
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3183 - - cam:101501659 788.875