Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3181 ATGGATAATAATTCAAATGAAGCATCATCATCATTGAGTTTTGTATCATCTCAATTATCAAATGCTTCAAGTAATAATCACAACATAACTTCCTCAACCAACAATGAACATGTGGCAATGGCAAATACTGAAATTGTGAGTTTGAATAAGCTCAGTGGAAGCCTTGAGAAGTTATTGAGTGATGTTGATTATGATTATTGTGATGCTGAGATTCTTGTTGAAGAAATCCCGGTCGGTATTCATCGATGTATACTGGCTTCACGAAGTCAATTTTTTCATGAACTTTTTAAGAAAGGAAAAGATGGAGAAGTTAAGGATGGAAAGGGAAAGCCAAGGTATCTCATGAAAGAATTGGTGCCTTATGGTAGTGTTGGATATGAAGCTTTCATTGTTTTCTTGCATTATTTGTATACTGGAAAGTTAAAGGCTCCACCACCAGAAGTGACAACATGTGTTGATGAAGCGTGTATTCATGATTCATGTCGTCCTGCTATTAACTTTGCTTTGGAACTTATGTATGCTTCTTCCACTTTTCAGATGAAAGAGCTCGCTTTAGTTTTTCAGAGGTGTCTCCTAAATTATGTTGACAAGGCTCTTGTAGAAGATGTCATTCCAATTCTAATGGCTGCACATCACTGCAAACAAGACCAACTTCTCTCTCATTGCATTCAGAGAGTAGCAAGGTCTGACATGGAAATCATATATTTGGAAAGAGAACTTCCTCATGAAGTTGTGACTGAAATCAAATCCCTCCGAGTCCAATCTCTGCCGGAATCAACACCGGATTCAATGGAAGTGGAACCTGTGATTGTGAGTGATAAGAGTATCAGGAAAATCCTTAAGGCATTGGACTCTGATGACGTCGAGTTACTGAAGCTTCTTTTAGACGAATCTAGTGTGACTCTTGATGATGCCTATGCACTGCACTATGCTTGTGCATATTGTGATTCTAAGGTTGTTCAAGAAGTTCTTACACTTGGATTGGCTGATATTCTCCTTAAAAATCCTCGCGGATACACGGTTCTTCATGTTGCCGCAAGACGAAAGGATCCATCCATTTTGGTTGCACTATTGAAAAACGGAGCTTGTGCATCAGAAACCACTCTTGATGGACAAACTGCTCTTTCAATTTGTCAGAGATTGACAAGGCGAAAGGATTATCATGAGAAAACGGCGACGGGGAAGGAGTCTCACAAGGATAGGCTTTGTGTTGATGTACTTGAGAGAGAGATGAGAAGAAGTTCCATGTCAGTGAACATGGAAGTTTTGTCACAATTAACTGCTGATGATTTACACATGAGACTGGATTACCTTGAAAATAGAGTTGCATTTGCTACGCTGTTCTATCCTGCTGAGGCTAGGGTAGCCATAGAGAATGCTGGGGCAGATTCAACACCACGCTATGCAAGTTCAACAGCTTTGAAGGGCAATATAAAAGAAGTAGATCTAAATGAAACTCCTTCTGTTAGAACAAGAAAACTCCAATTAAGATTACAATCCCTTTTAAAAATAGTTGAGAATGGTAGGCGTTTTTTTCCGCATTGTTCTGAAGTGCTTGATAAGTATCTAGACGATGATATGCCGGATGTTTTTGTCCTAGAGAAGGGAACGGAAGAAGAGCAGAGAGCAAAGAAAGCGCGGTTCATGGAACTTAAAGATGAGGTGCAGAAGGCATTTCACAAGGATATGGCTGAAAATAACCAATCAGGTTTTTCATCTGCATTGTCGTCTACATCATCGTCAGCCCGTAGGGAAAGTCTTAACCACAAAGTGAGGAGAAAATGA 1785 0.3966 MDNNSNEASSSLSFVSSQLSNASSNNHNITSSTNNEHVAMANTEIVSLNKLSGSLEKLLSDVDYDYCDAEILVEEIPVGIHRCILASRSQFFHELFKKGKDGEVKDGKGKPRYLMKELVPYGSVGYEAFIVFLHYLYTGKLKAPPPEVTTCVDEACIHDSCRPAINFALELMYASSTFQMKELALVFQRCLLNYVDKALVEDVIPILMAAHHCKQDQLLSHCIQRVARSDMEIIYLERELPHEVVTEIKSLRVQSLPESTPDSMEVEPVIVSDKSIRKILKALDSDDVELLKLLLDESSVTLDDAYALHYACAYCDSKVVQEVLTLGLADILLKNPRGYTVLHVAARRKDPSILVALLKNGACASETTLDGQTALSICQRLTRRKDYHEKTATGKESHKDRLCVDVLEREMRRSSMSVNMEVLSQLTADDLHMRLDYLENRVAFATLFYPAEARVAIENAGADSTPRYASSTALKGNIKEVDLNETPSVRTRKLQLRLQSLLKIVENGRRFFPHCSEVLDKYLDDDMPDVFVLEKGTEEEQRAKKARFMELKDEVQKAFHKDMAENNQSGFSSALSSTSSSARRESLNHKVRRK* 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3181 594 PANTHER REGULATORY PROTEIN NPR3 4 592 IPR044292 GO:0009862|GO:2000022|GO:2000031
Mtr5g3181 594 Gene3D Potassium Channel Kv1.1; Chain A 31 227 IPR011333 -
Mtr5g3181 594 ProSiteProfiles BTB domain profile. 67 145 IPR000210 GO:0005515
Mtr5g3181 594 SUPERFAMILY POZ domain 64 194 IPR011333 -
Mtr5g3181 594 Gene3D - 271 411 IPR036770 -
Mtr5g3181 594 PANTHER REGULATORY PROTEIN, PUTATIVE-RELATED 4 592 - -
Mtr5g3181 594 CDD BTB_POZ_NPR_plant 49 195 - -
Mtr5g3181 594 MobiDBLite consensus disorder prediction 562 594 - -
Mtr5g3181 594 SMART BTB_4 67 195 IPR000210 GO:0005515
Mtr5g3181 594 MobiDBLite consensus disorder prediction 562 584 - -
Mtr5g3181 594 Pfam Domain of unknown function (DUF3420) 230 279 IPR024228 -
Mtr5g3181 594 Pfam Ankyrin repeats (3 copies) 285 362 IPR002110 GO:0005515
Mtr5g3181 594 Pfam NPR1/NIM1 like defence protein C terminal 379 578 IPR021094 -
Mtr5g3181 594 SUPERFAMILY Ankyrin repeat 281 380 IPR036770 -
Mtr5g3181 594 ProSiteProfiles Ankyrin repeat region circular profile. 337 362 - -
Mtr5g3181 594 Pfam BTB/POZ domain 65 144 IPR000210 GO:0005515
Mtr5g3181 594 ProSiteProfiles Ankyrin repeat profile. 337 362 IPR002110 GO:0005515
Mtr5g3181 594 SMART ANK_2a 303 333 IPR002110 GO:0005515
Mtr5g3181 594 SMART ANK_2a 337 366 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3181 Mtr-Chr5 40695760 40699616 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Mtr5g3181 NPR1_like_C 2.5e-79 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3181 K14508 - gmx:100816582 812.372