Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3174 ATGGATTTGAATTTCTACCTTAAATACTCAAAGTGGGTATCAACAGTAGCAAGCATATGGATTCAATGCACAAGTGGATCACTCTACACTTTCTCAATCTACTCACAAACACTAAAGTCAACGCAGCATTACGATCAGTCAACGCTCGACATAGTTTCTGTTTCCAAAGACATTGGTGCAAACATCGGTGTCTTGTCTGGTCTCATATACGATTTTCTTGCCACGAGAACAAGAACTGGGCCGTGGGTTGTTCATTTGTTTGGCTCGGCCCAATGCTTCTTGGGCTATTTTCTTATGTGGGCTGCTGTCTCCGGTGTCCTGCCGCCGGTGCCGGTGCCGGTCATGTGTCTGTTTATGTTTGTGGCTGCTCATGCTCAGAGTTACTTTAATACTTCTAATGTTGTTACTGGTGTTCGCAACTTTCCTAATTATGGTGGAACCATTGTTGGTATCTTGAAGGGATTTCTAGGTCTAAGTGGAGCAATATTAATTCAAGTGTATCGAACTGTATTCAACAACAACCCTATGTCATATTTGCTGATGCTATCACTCTTACCACCTATCAACACTTTGATCCTTATGTGGTTTGTAAGAATTCACAACACTCGTCGTGAGGGAGAGTCAGAAAAGAAATATCTCAACATATTTTCTTTGATGGCTCTAGTTATTGCTGCATATCTTATGATTGTGATAATCCTAGAGAACATCCTTACTCTACAATTATCAATTCGCATATTTACATTCATTGTTCTTATGGTGTTGCTAGCCTCACTTCTTTGCATCGCATTTAAAGCACACGAAAAGAACTCTTCCAATAGCGCTTCAAAAAGTTTCCTTGCTGAAGGGTCCAACTTAATTGCAAGAGAAGATTCTTCCAACAACCTTTTACCAGCTGATGATACCAACAGCCAAAGGACTTTGCAACAAGGAGGAAACCTAAATCTTTTCCAAGCAGTGAAAACATTGAACTTTTGGATTCTGTTTGTTTCTATGGCATGTGGAATGGGATCAGGGCTGGCAACGGTTAATAATATGAGCCAAATAGGGGAATCCCTTGGCTATTCAACTCTTGAGACAGGTTCTTTGGTTGCTTTGTGGAGCATATGGAATTTTCTTGGCCGTTTTGGAGCTGGTTATGTCTCGGACTATTTTTTACACACAAGAGGATGGGCAAGACCTTTTTTTATGGTGATCACTTTGATGACCATGAGCATTGGTCATGTAGTGATTGCTTATGGACTTCCAGGCGCTCTATATGTCGGTTCGATATTAGTCGGTATTTGTTATGGTTCTCAGTGGTCCTTAATGCCTACAATCACGTCTGAGATATTTGGTGTGGGACATATGGGTAGCATTTTCAACACCATTACTATAGCAAGTCCAGTGGGATCATATATATTCTCTGTAAGAGTACTTGGTTATATATATGATAAAGAAGCATCAGGCACAGAAGGAAATAAATGTGCTGGGACTCATTGTTTTAAGTTTTCTTTTCTCATTATGGCATCTGCTGCTATTCTTGGTTCTCTGACAGCTTTGTGTTTGTTTTTGCGGACTAGACACTTTTATGGTCAGGTTGTTCTTAGAAGAATTCAAAATGTTATGTGA 1608 0.4011 MDLNFYLKYSKWVSTVASIWIQCTSGSLYTFSIYSQTLKSTQHYDQSTLDIVSVSKDIGANIGVLSGLIYDFLATRTRTGPWVVHLFGSAQCFLGYFLMWAAVSGVLPPVPVPVMCLFMFVAAHAQSYFNTSNVVTGVRNFPNYGGTIVGILKGFLGLSGAILIQVYRTVFNNNPMSYLLMLSLLPPINTLILMWFVRIHNTRREGESEKKYLNIFSLMALVIAAYLMIVIILENILTLQLSIRIFTFIVLMVLLASLLCIAFKAHEKNSSNSASKSFLAEGSNLIAREDSSNNLLPADDTNSQRTLQQGGNLNLFQAVKTLNFWILFVSMACGMGSGLATVNNMSQIGESLGYSTLETGSLVALWSIWNFLGRFGAGYVSDYFLHTRGWARPFFMVITLMTMSIGHVVIAYGLPGALYVGSILVGICYGSQWSLMPTITSEIFGVGHMGSIFNTITIASPVGSYIFSVRVLGYIYDKEASGTEGNKCAGTHCFKFSFLIMASAAILGSLTALCLFLRTRHFYGQVVLRRIQNVM* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3174 535 PANTHER PROTEIN NUCLEAR FUSION DEFECTIVE 4-LIKE 10 534 - -
Mtr5g3174 535 CDD MFS_Mch1p_like 10 508 - -
Mtr5g3174 535 Pfam Major Facilitator Superfamily 327 521 IPR011701 GO:0022857|GO:0055085
Mtr5g3174 535 Pfam Nodulin-like 11 262 IPR010658 -
Mtr5g3174 535 SUPERFAMILY MFS general substrate transporter 217 521 IPR036259 -
Mtr5g3174 535 SUPERFAMILY MFS general substrate transporter 15 204 IPR036259 -
Mtr5g3174 535 Gene3D MFS general substrate transporter like domains 314 522 IPR036259 -
Mtr5g3174 535 ProSiteProfiles Major facilitator superfamily (MFS) profile. 322 535 IPR020846 GO:0022857
Mtr5g3174 535 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 10 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3174 Mtr-Chr5 40627948 40632384 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3174 10 533 Nodulin-like Gene Family AT1G74780 55.784 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3174 - - lja:Lj1g3v0437880.2 821.231