Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3154 ATGGATACTCCTAGTTTCACCTTTGTACTATATACCCTCTTTCTTACTCTTTCTGTTTCTGTTTCTTCATCATCATCACTTCCTATGTCTTTGAAAACACAAGCTTCTATCTTAGTTTCTCTCAAACAGGATTTTGAATCCAAAACTTCTTTAAAAAGTTGGAATATCTCTAACTACATGTCCCTTTGTACTACTTGGTATGGTATTCAATGTGACACAAACAATAGTTCTGTTGTGTCACTGGATATATCAAACTTGAATGTTTCTGGAACTTTTTCATCTTCCATCACAAAACTATCAAACTTGAGATTCCTCAACATATCCAACAACATGTTCAATGGAAATCTAAGTTGGAAATTCTCTCATTTGAAAGAGCTTGAAGTTCTTGATGCTTACAATAATGAGTTCAATTGTTCACTCCCTCTTGGTGTCACTGAGTTACCTAAACTCAAGTACTTGAATTTTGGAGGAAATTTTTTCTATGGAGAAATTCCTTCAAAATATGGTAACATGTTGCAGCTTAACTATTTGTCTCTTGCAGGTAATGATTTGAGAGGTTTCATACCTTTTGAGCTTGGAAATCTTACTAATCTTACACACCTTTTGTTAGGTTATTACAATGAGTTTGATGGTGAAATTCCACCTCATTTTGGTAACCTTGTTAATTTAGTTCATCTTGATCTTGCAAACTGTGGTTTGAAAGGTTCAATTCCACATGAGCTAGGAAAACTTTACAAACTAGACACACTTTTCTTGCAAACCAATCAACTTAATGGTTCAATTCCACCTCAATTAGGGAATCTTAGTAGTTTGAAATCTCTTGATATGTCAAACAATGAGTTAAATGGAAACATACCTAATGAGTTTTCAAATCTTCGCGAACTCACACTCTTGAACTTGTTCATCAACAAACTCTATGGTGAAATTCCATCTTTTTTTTCTGAGTTACCAAATTTGGAAGTGTTAAAGCTTTGGCAAAACAACTTCACAGGTTCTATTCCTTCTAAGCTTGGAAAGAATGGTAAATTGAGTGAACTTGATTTATCAACAAATAAACTCACTGGATTAGTACCTAAATCTTTATGTCTTGGAAAAAGGTTAAAGATTCTAATCTTGCTTAACAATTTTTTGTTTGGTTCTTTGCCTAATGAGTTTGGTCAATGTTACACACTTCAAAGAGTTCGTTTAGGACAAAACTATTTAACAGGTTCAATACCAAAGGGTTTTCTTTATTTGCCTCAACTTTCACTTCTTGAACTTCAAAACAATTTGCTTGGTGGTTTTCTTCCACAACAAGAAATCACAAACACAAACACTTCTAAACTTGGAGAGATAAATCTTTCGAACAACCGTTTATCCGGATCACTACCAAATTCTATTGGAAACTTTCCAAACTTGCAGATTCTGCTTCTTCATGGAAATAGATTCTCAGGTGAAATCCCTTCAGATATAGGAAAGTTGAAGAACATTCTCAGGTTGGATATGAGTTTCAACAACTTTTCAGGAACTATTCCTATTGAAATAGGTAAATGTTCTTCACTTACCTTTTTAGATTTGAGTCAGAACAAATTATCAGGTCCTATTCCAATTCAGGTTTCTCAAATTCACATACTTAACTATCTTAATGTCTCATGGAACTACCTAAACCAAACACTTCCAAAGGAACTTGGTTCTATTAAGGGCTTAACTTCAGCTGATTTCTCTCATAATGACTTCTCTGGCTCAGTTCCTGAAATAGGACAATTCTCAGTGTTCAACTCTACATCCTTTGTTGGTAATCCAAAGTTATGTGGATATGATTTGAATCCATGCAACAAATCTTCATCAGAAACATTAGAGTCTCAGAAAAATGGTGGTGAGAAACCTGGAATTCCTGCAAAGTATAAGCTTCTGTTTGCATTAGCACTTTTGGTTTGTTCATTAGTTTTTGCAACATTTGCTATCATGAAGGGTAGAAAAGGAATTAAGAGGGACTCAAATCCATGGAAGTTAACAGCATTTCAGAAGATTGAATATGGAAGTGAAGACATCTTAGGATGTGTAAAGGAAAGTAACATCATAGGAAGAGGAGGTGCTGGTGTTGTATATGGAGGAACAATGCCAAATGGAGAAAAAGTAGCTGTGAAAAAGTTATTAGGAATTAACAAAGGTTGTTCTTATGATAATGGTTTATCAGCTGAAATAAAAACACTTGGTAGAATAAGGCACAGATACATTGTGAAGTTGTTAGCATTTTGTTCAAATAGAGACACTAATTTGCTTGTTTATGAGTACATGACAAATGGTAGTTTAGGTGAAGTGTTGCATGGGAAAAGAGGGGGGTTTCTTGAGTGGGATGTTAGGGTGAAAATAGCAACTGAAGCTGCTAAAGGACTTTGCTATTTGCACCATGATTGTTGTCCTTTGATTGTTCATAGAGATGTTAAGTCAAATAACATATTGTTGAACTCTGAGTTTGAGGCTCATGTTGCTGATTTTGGACTTGCTAAGTTCTTGCTGCAAGATACTGGTGGGACTTCTGAATGCATGTCTTCCATTGTTGGTTCTTATGGCTACATTGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTATACAGCTTTGGGGTGGTGCTACTAGAACTTTTAACAGGGAGAAGGCCAGTGGGAGATTTTGGTGAAGAAGGAATGGATATTGTTCAATGGACCAAGTTAAAAACTGATTGGAACAAAGAAAGTGTGGTGAAGATTCTTGATGGGAGGTTACATAACAATATTCCTTTAGATGAAGCAATGCAGTTATTCTTTGTAGCTATGTGTTGTGTTGAGGAACAAAGTGTGGAACGACCAACCATGAGAGAAGTGGTTGAAATGCTAGGACAAGTAAAGCAACCAAATATATTTCAAGTGTAA 2904 0.3523 MDTPSFTFVLYTLFLTLSVSVSSSSSLPMSLKTQASILVSLKQDFESKTSLKSWNISNYMSLCTTWYGIQCDTNNSSVVSLDISNLNVSGTFSSSITKLSNLRFLNISNNMFNGNLSWKFSHLKELEVLDAYNNEFNCSLPLGVTELPKLKYLNFGGNFFYGEIPSKYGNMLQLNYLSLAGNDLRGFIPFELGNLTNLTHLLLGYYNEFDGEIPPHFGNLVNLVHLDLANCGLKGSIPHELGKLYKLDTLFLQTNQLNGSIPPQLGNLSSLKSLDMSNNELNGNIPNEFSNLRELTLLNLFINKLYGEIPSFFSELPNLEVLKLWQNNFTGSIPSKLGKNGKLSELDLSTNKLTGLVPKSLCLGKRLKILILLNNFLFGSLPNEFGQCYTLQRVRLGQNYLTGSIPKGFLYLPQLSLLELQNNLLGGFLPQQEITNTNTSKLGEINLSNNRLSGSLPNSIGNFPNLQILLLHGNRFSGEIPSDIGKLKNILRLDMSFNNFSGTIPIEIGKCSSLTFLDLSQNKLSGPIPIQVSQIHILNYLNVSWNYLNQTLPKELGSIKGLTSADFSHNDFSGSVPEIGQFSVFNSTSFVGNPKLCGYDLNPCNKSSSETLESQKNGGEKPGIPAKYKLLFALALLVCSLVFATFAIMKGRKGIKRDSNPWKLTAFQKIEYGSEDILGCVKESNIIGRGGAGVVYGGTMPNGEKVAVKKLLGINKGCSYDNGLSAEIKTLGRIRHRYIVKLLAFCSNRDTNLLVYEYMTNGSLGEVLHGKRGGFLEWDVRVKIATEAAKGLCYLHHDCCPLIVHRDVKSNNILLNSEFEAHVADFGLAKFLLQDTGGTSECMSSIVGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEEGMDIVQWTKLKTDWNKESVVKILDGRLHNNIPLDEAMQLFFVAMCCVEEQSVERPTMREVVEMLGQVKQPNIFQV* 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3154 967 Gene3D Ribonuclease Inhibitor 267 342 IPR032675 -
Mtr5g3154 967 Gene3D Ribonuclease Inhibitor 190 266 IPR032675 -
Mtr5g3154 967 Gene3D Ribonuclease Inhibitor 31 189 IPR032675 -
Mtr5g3154 967 Gene3D Phosphorylase Kinase; domain 1 676 758 - -
Mtr5g3154 967 Gene3D Transferase(Phosphotransferase) domain 1 759 965 - -
Mtr5g3154 967 Pfam Leucine Rich Repeat 270 292 IPR001611 GO:0005515
Mtr5g3154 967 SMART LRR_typ_2 463 487 IPR003591 -
Mtr5g3154 967 SMART LRR_typ_2 341 363 IPR003591 -
Mtr5g3154 967 SMART LRR_typ_2 268 291 IPR003591 -
Mtr5g3154 967 SMART LRR_typ_2 316 340 IPR003591 -
Mtr5g3154 967 SMART LRR_typ_2 412 436 IPR003591 -
Mtr5g3154 967 SMART LRR_typ_2 220 244 IPR003591 -
Mtr5g3154 967 Pfam Leucine rich repeat N-terminal domain 32 72 IPR013210 -
Mtr5g3154 967 SUPERFAMILY Protein kinase-like (PK-like) 677 956 IPR011009 -
Mtr5g3154 967 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Mtr5g3154 967 SMART serkin_6 681 934 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3154 967 ProSiteProfiles Protein kinase domain profile. 681 964 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3154 967 Pfam Protein kinase domain 683 954 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3154 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 8 102 - -
Mtr5g3154 967 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE BAM3 89 964 - -
Mtr5g3154 967 SUPERFAMILY RNI-like 81 553 - -
Mtr5g3154 967 SUPERFAMILY L domain-like 342 453 - -
Mtr5g3154 967 PANTHER UNNAMED PRODUCT 89 964 - -
Mtr5g3154 967 PANTHER UNNAMED PRODUCT 8 102 - -
Mtr5g3154 967 PRINTS Leucine-rich repeat signature 343 356 - -
Mtr5g3154 967 PRINTS Leucine-rich repeat signature 511 524 - -
Mtr5g3154 967 Gene3D Ribonuclease Inhibitor 343 608 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3154 Mtr-Chr5 40408223 40412278 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3154 19 961 Receptor kinase-like Gene Family AT5G65700 56.437 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr5g3154 Pkinase 8.2e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3154 - - gmx:100816158 1443.33