Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3137 ATGGCAGCTGAGAAAGAACTTGCACCCTTTTCTCAATCCTCAAACACTGAGAATGAATTCTCACAAAATAACTATGTGAGATTTTCAACCTCTCTCCTAAACACTACCACAAACATTGGTACTGAAAACTTGGTTATGCCAAAATCACCACCAGGAGGAGCCCCCTCCTCTGGTATGTTAATCGATCTACCTCAAAATTCGAGGGAGGATCTGATCACAACCTCCTCAAAGAGATCAAGGGGTAGATCAAAGGGCTCCAAAAATAAACCCAAACCCCCAGTGGTGATCACCGTAGAGCCTGAAAGTTTTATGAAACAAATTTTTATCGAAATATCAGCTGGATGTGATGTTGTGGAGTCCATCATCAAGATGGCTTGGCGTCATCAAGCTGATATCTCAGTAATGAGAGGTTCCGGTCTTGTCTCTAATATTACCATCCGTAACTCGACATCTCATTCCCCTGCACTAACTATTGAAGGACCCATCAAAATGATGTCTCTCTCTGGCACTTACATCAATCCCAATTCTGATACTGTTCCTTCTGAATTCATCACCAACCCTAACCATTCTTCTTTTAGCATTTTCCTATCTGGTAATGGTAATGAGGGTCAGGTGTATGGTGGGATTGTTATAGGCAAGATAATGGCTTCGGGTAATGTTATGATTACCGCCACTCTTCAGAAGAAGCCCAAATTTTATAGGGTGACCTAG 711 0.4205 MAAEKELAPFSQSSNTENEFSQNNYVRFSTSLLNTTTNIGTENLVMPKSPPGGAPSSGMLIDLPQNSREDLITTSSKRSRGRSKGSKNKPKPPVVITVEPESFMKQIFIEISAGCDVVESIIKMAWRHQADISVMRGSGLVSNITIRNSTSHSPALTIEGPIKMMSLSGTYINPNSDTVPSEFITNPNHSSFSIFLSGNGNEGQVYGGIVIGKIMASGNVMITATLQKKPKFYRVT* 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3137 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 41 235 - -
Mtr5g3137 236 MobiDBLite consensus disorder prediction 40 94 - -
Mtr5g3137 236 SUPERFAMILY AF0104/ALDC/Ptd012-like 103 228 - -
Mtr5g3137 236 Pfam Plants and Prokaryotes Conserved (PCC) domain 106 225 IPR005175 -
Mtr5g3137 236 Gene3D - 105 236 - -
Mtr5g3137 236 CDD DUF296 107 223 IPR005175 -
Mtr5g3137 236 MobiDBLite consensus disorder prediction 1 22 - -
Mtr5g3137 236 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 41 235 IPR014476 GO:0003680
Mtr5g3137 236 MobiDBLite consensus disorder prediction 8 22 - -
Mtr5g3137 236 ProSiteProfiles PPC domain profile profile. 101 236 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3137 Mtr-Chr5 40137886 40138596 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3137 77 225 AT-hook Motif Nuclear Localized (AHL) Family AT2G35270 37.584 6.74e-26 100
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3137 - - mtr:MTR_5g089600 436.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3137 5 40137886 40138596 Mtr5g3137 5 40137886 40138596 ECH