Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3129 ATGTTGAGAGTCTGTCGATTACGAGTTGGAATGGCGATTCCAAAACTTTCTGAACTTTCCATAATTCCATCACTATTCTCCTTCTCTTTTACTTCCCATTCTCACTCCCAAATGCACACTTTTTCCTCCATAAAAACCTTCCATTTTCACTCACCTTCTTCTCTTCCTCTTTCACCATTTACTTTTATCATGTCTCCCTATGCAACGACTCTGTATAGCACTGGGAGTAGTGCTGTTGAAGGTGGTGGAGAAAGGGAAGTATTGGTGCAGCATTTGTTGGTGAAAGAAGATGACGAGAAACTATTTTTGAATCTTCAAAAGAGACTCTCAGCAGGTGAAGATTTGAGCGATCTTGCTGTGGACTATTCGGTGTGCCCATCTAAAGAAGAAGGAGGAAGGCTTGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGTGTTTAGTGCACCTTTAAACAAAGTTGTAATGTGCAAGACAAAATTTGGATGGCACCTGCTGCAGGTTTTATCTGAAAGGGAAGAATCTGTATTTCAAGACATTCAACCTGATGAGCTGCATGTGAAACTTCAAGATCCCAACTTCTCGAAGGAGGCACAGTTAATTGATGTTCGAGAGCCTGAAGAAGTGGACAAAGCGTCTTTGCCAGGATTTATGGTTCTTCCCCTCCTTCAATTTGGAACCTGGGTGCCTGAAATAAACACCAAATTGGATCTTCAAAAGAATACATATGTTCTTTGTCATCACGGTATTCGGTCGTTAAAGGTTGCCAGGTGGTTGCAGTCACAGGGGTTCAGGAAAATATACAATATTTCTGGAGGAATCAATGCCTATGCGGTGCAGGTCGATCCGTCGATTCCTACATACAATAGAGTGAAATTTGGTGAGAGGACTCCATCCAATATTTTAGCAAGTCACCCTTTCGGAACTTTCAACTCTTACTTGAGAGGCAAGGCATGA 969 0.4241 MLRVCRLRVGMAIPKLSELSIIPSLFSFSFTSHSHSQMHTFSSIKTFHFHSPSSLPLSPFTFIMSPYATTLYSTGSSAVEGGGEREVLVQHLLVKEDDEKLFLNLQKRLSAGEDLSDLAVDYSVCPSKEEGGRLGWVRKGQMVPEFEEAVFSAPLNKVVMCKTKFGWHLLQVLSEREESVFQDIQPDELHVKLQDPNFSKEAQLIDVREPEEVDKASLPGFMVLPLLQFGTWVPEINTKLDLQKNTYVLCHHGIRSLKVARWLQSQGFRKIYNISGGINAYAVQVDPSIPTYNRVKFGERTPSNILASHPFGTFNSYLRGKA* 323
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3129 322 Pfam PPIC-type PPIASE domain 93 174 - -
Mtr5g3129 322 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 292 - -
Mtr5g3129 322 ProSiteProfiles Rhodanese domain profile. 198 290 IPR001763 -
Mtr5g3129 322 Gene3D - 178 304 IPR036873 -
Mtr5g3129 322 Gene3D - 81 177 IPR046357 GO:0003755
Mtr5g3129 322 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 84 174 IPR000297 GO:0003755
Mtr5g3129 322 SMART rhod_4 184 287 IPR001763 -
Mtr5g3129 322 Pfam Rhodanese-like domain 197 282 IPR001763 -
Mtr5g3129 322 SUPERFAMILY FKBP-like 85 173 - -
Mtr5g3129 322 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 179 292 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3129 Mtr-Chr5 40002890 40006928 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3129 85 292 Sulfurtransferasese or Rhodanese AT5G19370 65.865 1.55e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3129 - - mtr:MTR_5g089330 603.979
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3129 5 40002890 40006928 Mtr5g3129 5 40002890 40006928 ECH