Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3128 ATGTTGAGAGCTTGTCAATTTCGCGTTGGATTACCGATTCCAAAACTCTCTTCACTTTCCACTATTCCTTCAATCTTCTCTTTCTCTTTTCCTTCACATTCTCATTCCAAAATCCACACTTTTTCCTACAAAAAACCCTTCCATTTTCACTCTCCTTCTCTTCCTCTTTCACCCTTTACTTCAACCATGCCTCCTAAAGCATCAGCTTCATATAGTACTGGAGGTAGTTCTGTTGAAGGTGGAGCGGAAAGGGAAATATTGGTGCAGCATTTGTTGGTGAAAGAAGATGACCCAAAACTATTGGTTGATCTTCAACAGAGAGTCGCTGCAGGTGAAGATTTGAGTGATCTTGCTGTGGAACATTCAATTTGCCCTTCTAAAGATGAAGGAGGAATGCTTGGGTGGGTGAGAAAGGGACAAATGGTTCCTGAATTTGAGGAGGCTGCGTTTAGTGCACCTTTAAACAAAATTGTAAGGTGCAAGACCCAATTTGGATGGCACTTGCTGCAAGTTTTATCTGAGAGGGAAGAACCAGTACTTCTAGACATTCAACCTGATGAGCTGCATGTGAAATTTCAAGATCCCAATTTCTTGGAGGAGGCACAGTTGATTGATGTTCGAGAGCCTGAAGAAGTGACCACCGCATCTTTGCCAGGATTTACAGTTCTTCCCCTTCGACAATTTGGAACCTGGGGGCCTGAAATAAATTCGAAATTTGATCTTCAAAAGGATACATATGTTCTGTGTCATCACGGAGTGCGGTCTTTACAGGTTGCCAGGTGGTTGCAGTCACAGGGGTTCAGGAAAGTATACAATATTTCCGGAGGAATCCATGCCTATGCGGTGAAGGTCGATCCGTCAGTTCCTACATACTGA 876 0.4326 MLRACQFRVGLPIPKLSSLSTIPSIFSFSFPSHSHSKIHTFSYKKPFHFHSPSLPLSPFTSTMPPKASASYSTGGSSVEGGAEREILVQHLLVKEDDPKLLVDLQQRVAAGEDLSDLAVEHSICPSKDEGGMLGWVRKGQMVPEFEEAAFSAPLNKIVRCKTQFGWHLLQVLSEREEPVLLDIQPDELHVKFQDPNFLEEAQLIDVREPEEVTTASLPGFTVLPLRQFGTWGPEINSKFDLQKDTYVLCHHGVRSLQVARWLQSQGFRKVYNISGGIHAYAVKVDPSVPTY* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3128 291 ProSiteProfiles PpiC-type peptidyl-prolyl cis-trans isomerase family profile. 83 173 IPR000297 GO:0003755
Mtr5g3128 291 Gene3D - 182 291 IPR036873 -
Mtr5g3128 291 CDD RHOD_2 182 285 - -
Mtr5g3128 291 Pfam Rhodanese-like domain 190 281 IPR001763 -
Mtr5g3128 291 Gene3D - 80 178 IPR046357 GO:0003755
Mtr5g3128 291 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 181 289 IPR036873 -
Mtr5g3128 291 SUPERFAMILY FKBP-like 84 172 - -
Mtr5g3128 291 ProSiteProfiles Rhodanese domain profile. 197 289 IPR001763 -
Mtr5g3128 291 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 1 291 - -
Mtr5g3128 291 Pfam PPIC-type PPIASE domain 97 173 - -
Mtr5g3128 291 SMART rhod_4 183 286 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3128 Mtr-Chr5 39996138 40001147 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3128 84 291 Sulfurtransferasese or Rhodanese AT5G19370 69.712 3.51e-104 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3128 - - mtr:MTR_5g089330 545.428