Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3122 ATGCGTCCTCCAGAGAAGAGAGTAGATTATAAGGTAGGAGATAAAGTAGAAGTATGCAGCGAAGATGAAGGGTTTGTAGGTTCATACTTTGAAGCTACAATTGTTTCATGTCTTGAGAGCGGAAAATATGTGATCCGTTACAAGAATCTTCTTAAAGATGACGAGTCGGAACTTCTTATGGAAACACTTTTTCCAAAAGATCTTCGTCCAATACCACCACATGTTCGTAATCCTTTGAAGTTTAAACTCAATCAAAAAGTTGATGTATTTGATAACGATGGTTGGTGGGTAGGTAAAATCGCTAGCGAGAAGATCTTGATGGAAAAGAGTTGCTACTATAGTGTGTATTTTGACTATTGCCATCAAACTATTTACTACCCTTGTGATCAGATTAGGGTTCATCAAGAATTGGTTTGGGGAGACTGGATCTTCGAGGCATAA 441 0.381 MRPPEKRVDYKVGDKVEVCSEDEGFVGSYFEATIVSCLESGKYVIRYKNLLKDDESELLMETLFPKDLRPIPPHVRNPLKFKLNQKVDVFDNDGWWVGKIASEKILMEKSCYYSVYFDYCHQTIYYPCDQIRVHQELVWGDWIFEA* 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3122 146 Pfam Agenet domain 13 73 IPR008395 -
Mtr5g3122 146 PANTHER - 7 145 - -
Mtr5g3122 146 Gene3D - 1 75 - -
Mtr5g3122 146 SMART agenet_At_2 79 139 IPR014002 -
Mtr5g3122 146 SMART agenet_At_2 8 76 IPR014002 -
Mtr5g3122 146 PANTHER AGENET DOMAIN-CONTAINING PROTEIN-RELATED 7 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3122 Mtr-Chr5 39965904 39966776 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3122 20 98 PHD Transcription Factor Family AT5G58610 33.673 1.01e-08 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3122 - - mtr:MTR_4g079980 229.95