Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3121 ATGGATAGTTCAGAGAATCTAGTAGATTGTGGGAGTATTCATGATGAAGGTATGGAAGTTGATAACTCTGATGATGATGAAGCATGTTGGAAGCCTGCAACGGGGATGCGTTTTTCTTGCATTGATGATGTCAAAACACTTTATAGAGAGTATGCTTTGAAAAAGGGTTTTCGGTGGAAGACCAGAACATCGAAAAAAAGAGATGATGGAGAGACCTGCTATGCAATTCTTGTTTGCACAAGAGAGGGGTCTCAAGGGTCAGAAATTCCGTGTACGTTAAAGACACCCCCATCCAAGACAAAAAATTGTCCTGCCAAGATTTGTATTAAGTTGGAAAAGGATGGTTTGTGGTACATTTCAAAATTTGAATCTAGACATTCTCACAAGACTAGCCCTACAAAGAGAATGGACTTGCATGTAAAAAGAACAATCGAAATCAATGAGGATGCAGGAGTGAGGACCATTAAGACTTTCCGATCTATTGTCAACAATGCGGAAGGGCATGAAAATATACCATTTTGCGAAAAAGACATGATAAATTATGTTAACAACGAACAACATTTAATTGGAAAAGAAGGTGATGGCAAGGCCTTAATGAGCTATTTTTCTAAAATGAGGGAACAAAATTCGAATTTCTTCTACGACATAGATTTGGATGACGATTTTCATGTAAGGAATGTGTTTTGGGCTGATGCAAGAAGTAGAGCTACTTATGAGTATTTTGGAGATGTTGTAACTTTCGACACAACATATTTGACCAATAAGTTTGACATGCCTTTTGCTACATTTGTAGGTGTGAATCACCATGGTCAATCAACATTACTTGGATGTGGGCTGCTCTCAGGAGAAGACACAGAGTCATTTGTGTGGCTTTTCAAATCATGGCTTCGTTGTATGCTTGGAAAGGCCCCTGTGGGAATTGTGACCGATCAATGTAAGGCTGTGCAAAATGCCATTGAGTTAGTCTTCCCTACAACACGCCATAGGTGGTGTTTATGGCATATAATGAAAAAAATTCCTGAAAAGCTCAACGAATACAGTGAATATAAAAGAATCAAGTCTGCGATGGAAGGAGCAGTTTATGATACACACACAACAACTGGTTTTGAAGAGAAATGGTGTTCCTTCATAGACAAGTTTATGCTTCAACAGAATGATTGGTTGAGTGGGTTGTATGAAGAGCGTCATAGATGGGCACCAACCTTTGTAAGAAAATATTTTTGGGCAGGTATGTCAACTACGCAGAGAAGTGAGAGCATGCATGCTTTCTTTGATGGGTATATCAATTCAACAACAAGTCTAAATCAATTTGTAAAGCAATATGATAATGCTCTTAGTAGTCGAGCAGAAAAAGAATTTGAAGCAGATTTTAATTCACTAGATACTACAATTCCGTGTGTGTCAAACTCGTCCATTGAAAAGCAATTGCAAGGTGAGTACACTCATGCCAAATTCAAAGAAGTTCAAGCTGAATTCATATCCAAAATGAATTGTGCTCCCTCGTTGAATGTTGTCGAGGGTTGCTTTGCTACTTATCATGTGTTGGAGGAGGTTGTAGTTGGAGGCAGACATAAAGAAAATGTCTTCAAAGTTGTGTTTAATCAGGAAAACCAGGATTTCAGCTGTGAATGCTCGTTGTTTGAGTTTAGAGGTATCCTGTGTTGTCATGTGTTATCTGTGTGTACACGAGAAAGGGTTAAAAATGTGCCAGAGAAGTATGTTTTAACACGATGGAAGAAAAATATTAAAAGGAAGCATTCATATATTAAGAGTAGTTATTGCGCGAGAGAATTGAAGCCAAAGATGGACAGGTTTGACAAATTGTGCAAGCATTTCTATGAGATTGCTGAAGTAGCCGCTGAATCTGAAGATGCAACTAAGGCACTCCATGAAACATTACATCAATTTAATTCTAATAAGGATGGTATAACTGACATTGTTAACAGAAGTTTCATTGATGACTCAAATCCAAACAACGGTATTGGAATTCACAGTCCAGTGCGGGTTAAATGTGAAGATCAAGGAAGTGAACCAAGCGAAGTAATGACAGACAGGCTACTACAGAGTGCAATATTGGAATGGTGA 2085 0.3832 MDSSENLVDCGSIHDEGMEVDNSDDDEACWKPATGMRFSCIDDVKTLYREYALKKGFRWKTRTSKKRDDGETCYAILVCTREGSQGSEIPCTLKTPPSKTKNCPAKICIKLEKDGLWYISKFESRHSHKTSPTKRMDLHVKRTIEINEDAGVRTIKTFRSIVNNAEGHENIPFCEKDMINYVNNEQHLIGKEGDGKALMSYFSKMREQNSNFFYDIDLDDDFHVRNVFWADARSRATYEYFGDVVTFDTTYLTNKFDMPFATFVGVNHHGQSTLLGCGLLSGEDTESFVWLFKSWLRCMLGKAPVGIVTDQCKAVQNAIELVFPTTRHRWCLWHIMKKIPEKLNEYSEYKRIKSAMEGAVYDTHTTTGFEEKWCSFIDKFMLQQNDWLSGLYEERHRWAPTFVRKYFWAGMSTTQRSESMHAFFDGYINSTTSLNQFVKQYDNALSSRAEKEFEADFNSLDTTIPCVSNSSIEKQLQGEYTHAKFKEVQAEFISKMNCAPSLNVVEGCFATYHVLEEVVVGGRHKENVFKVVFNQENQDFSCECSLFEFRGILCCHVLSVCTRERVKNVPEKYVLTRWKKNIKRKHSYIKSSYCARELKPKMDRFDKLCKHFYEIAEVAAESEDATKALHETLHQFNSNKDGITDIVNRSFIDDSNPNNGIGIHSPVRVKCEDQGSEPSEVMTDRLLQSAILEW* 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3121 694 Pfam FAR1 DNA-binding domain 47 130 IPR004330 -
Mtr5g3121 694 ProSiteProfiles Zinc finger SWIM-type profile. 529 565 IPR007527 GO:0008270
Mtr5g3121 694 Pfam MULE transposase domain 244 338 IPR018289 -
Mtr5g3121 694 PANTHER OS03G0843700 PROTEIN 19 637 - -
Mtr5g3121 694 SMART 26again6 540 567 IPR006564 GO:0008270
Mtr5g3121 694 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 19 637 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3121 Mtr-Chr5 39959465 39963830 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g3121 MULE 1.5e-33 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3121 - - gmx:102667848 753.436