Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3112 ATGGAACATAGAAGAAACTCATCATGGTTTCTTCTATTCTCAACTCTTTCTTGTCTTTTTCTCCCATGTTTCTTAGGTTCTGTTGGAGCTTACAAAAATTACACAGTGGGAGATTCTTTAGGCTGGTTTGACAATCTTGAAAAGCCAACTGTTAATTATCAGAAGTGGGTTGCCAAGAAACAATTCAGCTTGGGAGATTTCCTCATTTTCAACACAGACAATAACCACTCTCTTGTTCAAACATATAATTTCACCACATACAAACAATGTGATTATGATGATGCACAAGACAAGGACACAATCCAATGGTCATCAGTTGATCCGTCCAACACTGATATACATCCAGTCACAGTGGCAGTTCCTTTACTGAAAGAAGGGGCAACATATTTCTTCTCTAGTGATTATGATGGTGAACAATGCAAAAATGGACAACATTTCAAAATAAATGTGACTCATGGACAAGGGTTGCCGAAGAGTCTTCAAAAGCCGTCCGAAGATTCTCCATCTCCTGCTAGTCCGATTTCTGGTGACGATGAGTCTGCACCAGACACAAATGTTCCTTCCAATTTCAACAATCCTAAGGAAGATAGTGACGATGAAAAAACTAGTGACAAAGATAAAGATAAAGAGGAATCAAGTTCTCTTTCGATGTTAAAGTATGTAAAATTTCACAACAAGTTATATGGTTGCCTTGTTTTATTAGGGACATTTTTCTTTTTTTAG 723 0.3721 MEHRRNSSWFLLFSTLSCLFLPCFLGSVGAYKNYTVGDSLGWFDNLEKPTVNYQKWVAKKQFSLGDFLIFNTDNNHSLVQTYNFTTYKQCDYDDAQDKDTIQWSSVDPSNTDIHPVTVAVPLLKEGATYFFSSDYDGEQCKNGQHFKINVTHGQGLPKSLQKPSEDSPSPASPISGDDESAPDTNVPSNFNNPKEDSDDEKTSDKDKDKEESSSLSMLKYVKFHNKLYGCLVLLGTFFFF* 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3112 240 PANTHER BLUE COPPER PROTEIN 23 213 IPR039391 GO:0009055
Mtr5g3112 240 MobiDBLite consensus disorder prediction 154 214 - -
Mtr5g3112 240 SUPERFAMILY Cupredoxins 32 150 IPR008972 -
Mtr5g3112 240 MobiDBLite consensus disorder prediction 193 214 - -
Mtr5g3112 240 ProSiteProfiles Phytocyanin domain profile. 32 152 IPR003245 GO:0009055
Mtr5g3112 240 MobiDBLite consensus disorder prediction 154 192 - -
Mtr5g3112 240 Gene3D - 31 155 IPR008972 -
Mtr5g3112 240 PANTHER BNAA08G26900D PROTEIN 23 213 - -
Mtr5g3112 240 Pfam Plastocyanin-like domain 42 144 IPR003245 GO:0009055
Mtr5g3112 240 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 18 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3112 Mtr-Chr5 39826966 39829180 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3112 14 201 Phytocyanin Superfamily AT1G08500 59.278 4.04e-77 231
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3112 - - gmx:100499721 307.375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr5g3112 5 39826966 39829180 Mtr5g3112 5 39826966 39829180 ECH