Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3108 ATGGACGCAAAGGCAGCAACAAATTTTGGAAACATGATATTAAACCGAACAATTTTCAAATATGCATATATTAATACAACAGCCTCGGATCCTGGCGGCAAAGTTTTAGAGTTAAATGTTTGTATTGACATGCCCCCTAAGGTTGTATCTGACGGCTTTTGGGCTAATCATGATCAAGCTGCAATGCCTATGCAATCCACTTTGCCATTGTTAGAGCTTCAAATTCTCACAATCTTTGTCATTACTCAATGCTTTCATTTGGTACTCAAACGCATTGGAGTCCCTTATTTCGTTTCACAAATCTTGGCTGGTTTAGTTCTAGGACCATCATCTTTGAAGATTTCAAATAGATGGAATGGATTCAAAAACATCTTGTTTCCATACGGTATTGAAGATGTAATAAGTGTAATATCCTTAATTGGCTATGCATTTTTCCTGTTTCTATGTTGTGTGAAAATGGACTTCACCATTATAACAAGAACAGGTAGAAAAGCATGGGCAATAGCTTTTTGTTCCTTTATGATTCCAACGTTTGTTGGTCTCGTAGTATGTTACAGATTCTCAGAATATTGGGGACACAAGATGGGAGATTTCGAAGCAAAAAACCTTCCTGTTATAGTTATAGGACAAAGTGGCTGTTATTTTGTTGTGATAGCTTCTTTGCTCTCTGACCTTGAGATTCTTAACTCAGAACTTGGACGTTTAGCACTCTCAATAGCAATGGTTATGGATTCTTTCAACTCAATTGTTACAGGAATTGGCACAGCTTTTGTTAGCAGCCTCCCAGCTGATCTAAGCAAGGGTGCTGATGGAGCGGCACATGTTAAAGCTTTTTTAGCTGTTTTCTATTACATTTGTTTCATGGTAGTGACTCCTCTTGTAGTTCGTCCTATACTGCAGTGGTTTGTTAGTAGAACGCCAGAAGGTAGACCGGTGAAGAAAGAATACACCTATATTGTGTTCGTTATGGCTCTGGCAGTTGGAATGTTGGCATTAGTGCCAAAGCAAAGTATTATAGGTGGAATGTGTTTGCTTGGTCTTATTGTACCTGAAGGTCCTCCATTAGGAACTGAAATGATTAAGCAATTGGAATTGTTTTGTAGTTGGTTCCTTTTTCCCATTTTTGTCACAAGTTGTGCTATGAAGGTTGATCTTAATATGCATGTTAAAAGCGAGTATGTTTATGTTTGGCTTGGTTTTATTGTTGCTATTCATTTGTTTAAGATGCTGGTGACCACTGGAATTTGTTGGTATTGTAACATGCCTATGATTGATGGTTTGTGTCTTGCTCTCATGTTGAGTTGTAAAGGTGTTGTGGATTTTTGCACGAATGTGTTTCTTCATGATGCCAAGCATAAGTGGTTTATAATAATTTACTTGTTGAATAAAAGTTATCTAATTTTGTCCACTATAATGCATGTGCAGCTTTTTAGCAAAGAATCACTATCCGTTATGAGCTTAAATGTGTTGGTGATTGGAACCTTGGCACGCATTGGTGTGAAGTTCTTGTATGACCCTTCAAGAAAATATGCAGGTTATCAAAAAAGGAACATCTTGAGCTTGAAACCAAACTCAGAACTTAAGATAGTTTCATGCATCCTCAAACCAAGTCACATAATTCCCATCAAGAATGTTTTTGACATTTGCAGTCCGACATCAAACAATCCATTGGTAGTTCATATCATACATCTCATGGAGCTTGTAGGAAGGTCTTCACCCGTTTTCATCTCGCATCGTCTTCAAGAAAGAATTGGTTCAGGTCGCTACGCTTTCTCTGAGGATGTTATTGTTACCTTTGATCTTTTCGAACATGACAATTTAGGTACTGCAAAAGTGAATACCTACACAGCTATATCTCCTATGGGTTTAATGCACGACGATATTTGTTATCTTGCATTAGACAAACTTGCGTCCATCATCATTGTTCCTTTTCATTTGAGATGGTTAGAGGATGGTTCTGTTGAATCAGGGGACGCGAACATCAGGTCTTTGAACACCAAGGTTCTTGAAAGAGCACCTTGTTCGGTAGCGATCCTTGTGAATAGAGGATACTCTTCTCCATTCAACCACAATGATAATACAAAGCAAATTGCCATGATTTTCTTGGGGGGTCCAGATGATAGAGAAGCGTTATGTTTAGCTAAAAGGACAATCAAAGAAGATACTTATCACTTGGTTGTGTATCATTTGGTTTCATCAAACAAGAATGAGGAGGCCACTAATTGGGAGGTTATGCTTGATGATGAGTTACTAAAGAGTGTTAAGGGAGTTTATGGTAGTGTAGATAATGTGACATATGAAAAAGTAGAAGTTGAAAACTCTTCAGATACCACTGCATTCATCTCAGATATAGCGAATCAACATGATTTCATTATAGTTGGGAGGCGAAATGGCATCAAATCGCCTCAGACACAAGCACTTGCATCGTGGACTGAGTATCCAGAGTTGGGTGTGTTGGGAGATTTGCTTGCTTCACCAGATACTATTACCAAAGCTTCAATTTTAGTTGTGCAGCAACAATTAATGCCTAAGCCGTGA 2538 0.3826 MDAKAATNFGNMILNRTIFKYAYINTTASDPGGKVLELNVCIDMPPKVVSDGFWANHDQAAMPMQSTLPLLELQILTIFVITQCFHLVLKRIGVPYFVSQILAGLVLGPSSLKISNRWNGFKNILFPYGIEDVISVISLIGYAFFLFLCCVKMDFTIITRTGRKAWAIAFCSFMIPTFVGLVVCYRFSEYWGHKMGDFEAKNLPVIVIGQSGCYFVVIASLLSDLEILNSELGRLALSIAMVMDSFNSIVTGIGTAFVSSLPADLSKGADGAAHVKAFLAVFYYICFMVVTPLVVRPILQWFVSRTPEGRPVKKEYTYIVFVMALAVGMLALVPKQSIIGGMCLLGLIVPEGPPLGTEMIKQLELFCSWFLFPIFVTSCAMKVDLNMHVKSEYVYVWLGFIVAIHLFKMLVTTGICWYCNMPMIDGLCLALMLSCKGVVDFCTNVFLHDAKHKWFIIIYLLNKSYLILSTIMHVQLFSKESLSVMSLNVLVIGTLARIGVKFLYDPSRKYAGYQKRNILSLKPNSELKIVSCILKPSHIIPIKNVFDICSPTSNNPLVVHIIHLMELVGRSSPVFISHRLQERIGSGRYAFSEDVIVTFDLFEHDNLGTAKVNTYTAISPMGLMHDDICYLALDKLASIIIVPFHLRWLEDGSVESGDANIRSLNTKVLERAPCSVAILVNRGYSSPFNHNDNTKQIAMIFLGGPDDREALCLAKRTIKEDTYHLVVYHLVSSNKNEEATNWEVMLDDELLKSVKGVYGSVDNVTYEKVEVENSSDTTAFISDIANQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTITKASILVVQQQLMPKP* 846
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3108 845 PANTHER CATION/H + ANTIPORTER 474 843 - -
Mtr5g3108 845 PANTHER CATION/H + ANTIPORTER 22 473 - -
Mtr5g3108 845 Pfam Sodium/hydrogen exchanger family 78 450 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr5g3108 845 Gene3D - 71 452 IPR038770 -
Mtr5g3108 845 PANTHER CATION/H+ EXCHANGER 2 22 473 - -
Mtr5g3108 845 PANTHER CATION/H+ EXCHANGER 2 474 843 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3108 Mtr-Chr5 39764754 39767784 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3108 40 837 Antiporter Super Family AT3G44900 36.199 4.86e-149 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3108 - - gmx:100778180 999.193