Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3106 ATGAATCAGGACAAAGCAGAAAAATTTACAAATATGATATTAGCCCGAACAATTTTTCCACGTTCATCTATTAATACAACAGCCTCAGATCCTGACGGCAAATTTTTAGTCTTAAATGTTTGTATTGACATGCCACCCAAGGTTGTATCTAATGGCAATTGGGCTAATCATGATCAAGCTGCAATGCCTATGCAATCCACTTTGCCATTGTTAGAGCTTCAAATTCTCACAATCTTTGCCATTACTCAATGCTTTCATTTGGCTGGTTTAGTTCTAGGACCATCTTTGAAGTTTTCAAAAACATGGACTGGATTCAAAAACATATTGTTTCCATACGGTACTGAAGATGTAATAAGTGTAATATCCCTAATTGGATATGCATTTTTCCTATTTCTAACTACTGTGAAAATGGACTTCACAATGATAACAAGAACAGGTAGAAAAGCATGGACAATAGCTTTTTGTTCCTTTTTGATTCCAATGGTTTTTGGTCTCCTAGTGTGTTACAGATTCCCAGAATATTGGATACACGAGATGGGAAATTTTGAAGCAAAAAACCTTCCTGTTATAGTTATAGGACAAAGTGGTTGTTACTTTGCTGTCATAGCTTCTTTGCTCTCTGACCTTGAGATTCTTAACTCAGAACTCGGACGTTTAGCACTCTCAACAGCTATGGTTATGGATTCTTTCAACTCAATTGTTACAGGAATTGGCACAGCTTTTATTAGCAGCATCAAAACAGATTCACATGATAATGGGGATGGAAAAGGAACTCTTAAAGCCTTTTTAAATGTTTGCTATTACTTATGTTTTATGGTAGTGACTCCTCTTGTGTTGCGTCCTATATTGAAGTGGTTTGTTAAAAAGACACCAGAAGGTAGACCGATGAAGAAAGTATACACATATATTGTGTTCATTATTGCTCTTGCAGTTGGAATGTTGGGATTATTGACAAAGCAAAGTGTTCTAGGTGGAATTTGCATTGTTGGTCTTATTGTACCTGAAGGTCCTCCATTAGGAACTGAAATGATTAAGCAATTGGAATTGTTTTGTAGTTGGTTCCTTTTTCCTATTTTTGTCACAAGTTGTGCTATGAAGGTTGATCTTAGTGTATATGTTAAAAGCGAGTATATTTATGTTTGGCTTGGCATTATTGTTGCTGTTCATTTGTTCAAGATCCTGGTGACCATTGGAATTTGTTGGTATTGTAACATGCCTATGACTGATGGTTTGTGTCTCGCTCTCATGTTGAGTTGTAAAGGTGTTGTGGATTTTTGCAACAATGTGTTTCTTCATGATTCCATGCTTTTGAGCAGTGAAGCACTATCCGTTTTGAGTATAAATGTGTTGGTGATTGGAACCTTGGCACGCATTGGTGTGAAGTACTTGTATGACCCTTCAAGGAAATATGCAGGTTATCAAAAGCGAAACATCTTGAGCTTGAAACCAAACTCAGAACTTAGGATAGTTTCATGCATCCTCAAACCAAGTCATATAATTCCCATCAAGAATGTTCTTGACATTTGCAGTCCAACATCAAGCAATCCATTGGTAATTCATATCTTACATCTCTTGGAGCTTGTTGGAAGGTCTTCTCCCGTTTTCATCTCGCACTGTCTTCAAGAAAGAGTTGGTTCAAGTTACCACACTTTCTCTGAAGCTGTCATTGTTACCTTTGATCTTTTCGAACATGACAATGCTGGTACTGCATCAGTGAGTACCTACACAGCTATATCGCCACTGCGTTTCATGCACGATGATATTTGTTATCTTGCATTGGACAAACTTGCATCCATCATCATTCTTCCTTTTCATCTGAGATGGTCAGAGGATGGTTCTGTTGAATCGGTGGATGAGACCACAAGGTCTTTGAACACCAAGGTTCTTGAAAGAGCACCTTGTTCGGTAGCAATCCTTGTGAATAGAGGACACTCTTCTCCATTCAACCACAATGAGAATTCAAAGCAAATTGCCATGATTTTCTTAGGAGGTTCAGATGATAGAGAAGCATTGTGTTTGGCTAAAAGGACAATCAAAGAAGATACTTATCACTTGGTTGTGTATCACTTGGTTTCAACAATCAAGAATGATGAATTCACTAGTTGGGATGTTATGCTTGATGATGAGTTACTAAAGGGTGTTAAGGGAGTTTATGGTAGTGTAGATAACGTGACATATGAAAAAGTAGAAGTCGAAAACACTTCTGATACCACGACATTCATCTCAGATATAGCGAGTCAACATGATTTCATTATAGTTGGGAGGCGAAATGGCATCAAATCGCCTCAGACACAAGCACTTGCATCGTGGACTGAGTATCCAGAGTTAGGTGTGTTGGGAGATTTGCTTGCTTCACCAGATACTATTACCAAAGCTTCAATTTTAGTTGTGCAACAACAACTAATGCCTAAGGCGTCATAA 2421 0.3792 MNQDKAEKFTNMILARTIFPRSSINTTASDPDGKFLVLNVCIDMPPKVVSNGNWANHDQAAMPMQSTLPLLELQILTIFAITQCFHLAGLVLGPSLKFSKTWTGFKNILFPYGTEDVISVISLIGYAFFLFLTTVKMDFTMITRTGRKAWTIAFCSFLIPMVFGLLVCYRFPEYWIHEMGNFEAKNLPVIVIGQSGCYFAVIASLLSDLEILNSELGRLALSTAMVMDSFNSIVTGIGTAFISSIKTDSHDNGDGKGTLKAFLNVCYYLCFMVVTPLVLRPILKWFVKKTPEGRPMKKVYTYIVFIIALAVGMLGLLTKQSVLGGICIVGLIVPEGPPLGTEMIKQLELFCSWFLFPIFVTSCAMKVDLSVYVKSEYIYVWLGIIVAVHLFKILVTIGICWYCNMPMTDGLCLALMLSCKGVVDFCNNVFLHDSMLLSSEALSVLSINVLVIGTLARIGVKYLYDPSRKYAGYQKRNILSLKPNSELRIVSCILKPSHIIPIKNVLDICSPTSSNPLVIHILHLLELVGRSSPVFISHCLQERVGSSYHTFSEAVIVTFDLFEHDNAGTASVSTYTAISPLRFMHDDICYLALDKLASIIILPFHLRWSEDGSVESVDETTRSLNTKVLERAPCSVAILVNRGHSSPFNHNENSKQIAMIFLGGSDDREALCLAKRTIKEDTYHLVVYHLVSTIKNDEFTSWDVMLDDELLKGVKGVYGSVDNVTYEKVEVENTSDTTTFISDIASQHDFIIVGRRNGIKSPQTQALASWTEYPELGVLGDLLASPDTITKASILVVQQQLMPKAS* 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3106 806 PANTHER CATION/H + ANTIPORTER 22 804 - -
Mtr5g3106 806 Pfam Sodium/hydrogen exchanger family 86 452 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr5g3106 806 PANTHER CATION/H+ EXCHANGER 2 22 804 - -
Mtr5g3106 806 Gene3D - 84 471 IPR038770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3106 Mtr-Chr5 39757194 39760368 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3106 40 797 Antiporter Super Family AT3G44900 36.128 4.87e-143 440
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3106 - - mtr:MTR_7g052895 1078.16