Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3087 ATGAGCATAAATTCAAATGATACTTTGTTCTACCAAATTAAAAGATTGAATGAAACAATATACAATGTTTGTATTGAGGCTCCACCTCCTATTGTTTCAGATGGTTTATGGGCTGGCCACGAAAATGGAAAGACACCAATGAAATTCTTCTTTCCCATGTTTGAGTTACAATTGGTTATCATTTTTGCACTCACTCAAATATGTAGTTTTCTTCTCAAACCTTTGAGACTCCCTCAATTCCTTCCACAAATGATTGTTGGGTTGATTCTAGGTGTTTCATTTGAGCTAAAATCATTGGAAGCATACATGGGCAAGTTGTTTCCATATGGAACTCATGACGTAATTTCATCAATTTCATCATTAGGTATGGTGATCTTCGTTTTCATAAACGGTGTACAAATGGATTTCAGCTTGATAACGAGGACAGGAAAGAAAGCATGGATAATTTCAATAATTGGATTATGTGTACCATTATGTGTTTTGTTTTTACCACTTCTAACATTGCCTGGAAGAATCGAAGCCATTCAAAAAGTACACGGCGGCGGTGGAATCATAGTGGCAACGTTATCTCACAGTCTAAGTCAATTTTCAACAATCGCTTCACTTCTAAGTGAACTTCAAATCCAAAACTCAGAGCTTGGTAGATTGTCTTTGTCCTCGGCTTTGGTCTGTGACATACTAACCACAATTATTTCAGCCAATATTATTGCTGTTCAGACTAGTTCTAATTCGACACCGATTTTAAGAAACATGATCTTACTTTATACATTAATTGCATTAATTCCATTGGTATGTAGACCAATAATGTTTTGGATCATCAAACGTACACCAGAAGGAAGACCTGTGAAGGATAGTTACATTTATGTTATCATTTCAATGGTTTTTGTTCTTGGTATTTTGTCAGTTAAGATTAATCAATTATTTGGCTTAGGAGCTTTCATTTTGGGACTGTCTGTTCCTGAAGGACCTCCTCTAGGATCTGCATTGGTTAAGAAGCTTCAGTTCTTTGGTACAACATTATTTTTGCCTATCTTTGTAACTACTTGTGTGTTTAAAGCGGATTTTTCAATGGATATGTCATCATATGTTATGGTATCTGCTGGTTTACTGGTCCTTGCAACTCACTTGGTCAAAATGGCAGCATTATTTATAACTGCCCTTTGTTGCAAAATACCTGTCATTGATGCTTTGTGTATTTCCCTTATTTTGAACACTAAAGGCGTGATGGAAGTTGGCATATACAATTCCGCATTTGACGATCAAGTTATTGATAGAAAAATATTTGGAGTGATGATGATAAGTATAATGATTATAGCAACCATTGTGCATTGGTCAGTGAAGTTATTATATGATCCATCAAGAAAATATGCTGGATACCAAAAAAGGAATATGATGAGCTTAAAAAGAAACTCAGAGCTAAGAATACTAGTAACACTTCAAAAACAGAACCATATTTCAGCAGCAACAGATTTCCTAGACTTATGTTGTCCAACACAAGAAAAACCAATCACAGTTGATGTTCTTCATGTAATTGAGCTTGTTGGAAGAGCCTTACCTCTTTTCATTCATCATCACCTTCAAAGACAAGCATTAGGATCTACTTCATATAAATCATACTCAGACGATGTTATCCTCGCTTTCGATATATACGAGAATGATAATCAAAATGCAGTATCAATAAACACTTACACAGCAATATCTCCACCAAATCTCATGTTTGAAGATGTTTGTAATCTTGCATTGGACAAAGTTGCAACCATCATCATTCTTCCATTTCATATAAGATGGTCAAGTGATGGTGTAGTTGAATCTGATGACAAGAAAATACTAAGAGCATTGAACCGCAGAGTACTTGAAATTGCTCCATGTTCTGTTGGAATCCTTGTAGCTCGTGCTAATTCAATGCAGAAACCAACATCAATAACATCAGAATGTTCCATGACTCAATTAGCCATCATATATTTAGGTGGAAATGACGATGATGAAGAGGTCTTATGTTTAGCAAAACGAGCGATGAATAATCCTAAGATCAACCTAGTTGTTTACCGTCTTGTTGCTAAGGAAAACATAGTAGAATTGGAGGAATTAACGGTAATTGGCGATGAAATGTTGGAAGAATTGAAAAATGCTGAAAATGTGAGGTATCAAGAAGTTTTTACTGAGAATGGATCACAAACAGCATCTTTTCTACGTGAGATTGTGAACGAACATGATTTCTTTATAGTTGGGAGAAGACATGAAACTCAATCTCCTCAAACTGATGGATTAGCAGAATGGAGTGAATTTCCAGAACTCGGTGCTATTGGTGATTTTCTTGTTTCACCTGATCTTAATAGTAGTGCATCTGTTTTGGTTGTGCAACAACAACTTTCACGTGTGAATGACGTTAAAAAGTGA 2397 0.3559 MSINSNDTLFYQIKRLNETIYNVCIEAPPPIVSDGLWAGHENGKTPMKFFFPMFELQLVIIFALTQICSFLLKPLRLPQFLPQMIVGLILGVSFELKSLEAYMGKLFPYGTHDVISSISSLGMVIFVFINGVQMDFSLITRTGKKAWIISIIGLCVPLCVLFLPLLTLPGRIEAIQKVHGGGGIIVATLSHSLSQFSTIASLLSELQIQNSELGRLSLSSALVCDILTTIISANIIAVQTSSNSTPILRNMILLYTLIALIPLVCRPIMFWIIKRTPEGRPVKDSYIYVIISMVFVLGILSVKINQLFGLGAFILGLSVPEGPPLGSALVKKLQFFGTTLFLPIFVTTCVFKADFSMDMSSYVMVSAGLLVLATHLVKMAALFITALCCKIPVIDALCISLILNTKGVMEVGIYNSAFDDQVIDRKIFGVMMISIMIIATIVHWSVKLLYDPSRKYAGYQKRNMMSLKRNSELRILVTLQKQNHISAATDFLDLCCPTQEKPITVDVLHVIELVGRALPLFIHHHLQRQALGSTSYKSYSDDVILAFDIYENDNQNAVSINTYTAISPPNLMFEDVCNLALDKVATIIILPFHIRWSSDGVVESDDKKILRALNRRVLEIAPCSVGILVARANSMQKPTSITSECSMTQLAIIYLGGNDDDEEVLCLAKRAMNNPKINLVVYRLVAKENIVELEELTVIGDEMLEELKNAENVRYQEVFTENGSQTASFLREIVNEHDFFIVGRRHETQSPQTDGLAEWSEFPELGAIGDFLVSPDLNSSASVLVVQQQLSRVNDVKK* 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3087 798 Pfam Sodium/hydrogen exchanger family 59 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr5g3087 798 Gene3D - 53 457 IPR038770 -
Mtr5g3087 798 PANTHER CATION/H + ANTIPORTER 12 794 - -
Mtr5g3087 798 PANTHER CATION/H+ EXCHANGER 3 12 794 - -
Mtr5g3087 798 Coils Coil 693 713 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3087 Mtr-Chr5 39581677 39584726 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3087 23 786 Antiporter Super Family AT3G44900 36.986 1.27e-154 469
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3087 - - cam:101512648 1125.15