Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3086 ATGAGCATAAATTCAAATTATACTTTGTTCAACGAAATTAAAAGATTGAATGGACCAATATACAATGTTTGTTCTGAGGCTCCACCCCATATTGTTTCAGATGGTTTATGGGGTGGCTACGAAAATGGAAGGAGACCAATGAAATCCTTCTTGATCTTGTTTGAGTTACAATTGGTTATCATTTTTGCACTCACTCAAATATGTAGTTTTCTTCTCAAACCATTGAGACTCCCTCAATTCCTTCCAGAAATGATTGCTGGGTTGATTCTAGGTGTCTCATTTGAGCTAAAACCATTAGACACATACATGGGCAAGATATTTCCATATGGAACTCATGACGTAATTTCAACAATTTCATCATTAGGTATGGTGATCTTCGTTTTCATTAACAGTGTACAAATGGATTTCAGCTTGATAACAAGGACAGGAAAGAGAGCATGGATAATTTCAATAATTGGATTATCTGTACCATTATGTGTTGGTTTTATACCACTACTAACATTGCCTGGGATAGTTCAAGCCATTCAAAAATTACATGGCGGCAATGGAGTCATGGTGGCAATGTTATCTCACAGTCTAAGTCAATTTTCAACAATCTCTTCACTCCTAAGTGAACTTCAAATCCAAAACTCAGAGCTTGGTAGATTAACTTTGTCCTCGGCTTTGGTCTGTGACATACTAACAACAGTTATTTCAACCAATTTTGTTGCTCTTATGACTAGTCCTGATTTGACGACACTTTTGAGAAACATATTCTTACTTTATATATTGTTTGTATTAATACCATTGGTATGTAGACCAATAATGTTTTGGATCATCAAACATACACCAGAAGGAAGACCTGTGAAGGATAGTTACATTTATGTTATCATTTCAATGGTTTTTGTTCTTGGTATTTTGTCAGTTAAGATTAATCAAGAATTTGTCTTGGGAGTTTTCGTTTTGGGACTGTCTGTTCCTGAAGGACCTCCTTTAGGATCTGCATTGGTTAAGAAGCTTCAGTTTTTTAGTACAACATTCTTTTTGCCAATCTTTGTAACAACTTGTGTGTTGAAAGCAGATTTTTCAATGGATTTTTCATCATCTATGATGGTGTATACTGGTTTAGCGGTCCTTGTAACTCACTTGGTCAAAATGGCAGCATTATTTATAACTGTCCTTTGTTGCAAAATACCTGTCATTGATGCTTTGTGTATTTCCCTTATTTTGAACACTAAGGGCGTGATGGAAGTTGGCATCTACAATTCCGCATTTGACGATCAAGTTATTAATAGGAAAATATTTGGAGTGATGATGATAAGTATAATGATTATAGCAACCATTGTGCATTGGTCAGTGAAGTTATTATATGATCCATCAAGAAAATATGCTGGATACCAAAAAAGGAACATGATGCGCTTAAAAAGAAACTCAGAGCTAAGAATACTAGTAACACTTCAAAAACAGAACCATATTTCAGCAGCAACAGATTTCCTAGACTTATGTTGTCCAACACAAGAAAAACCAATCACAGTTGATGTTCTTCATGTAATTGAGCTTGTTGGAAGAGCCTTACCTCTTTTCATTCATCATCGCCTTCAAAGACAAGCATTAGGATCTACTTCATCTAAATCATACTCAGACGATGTTATCCTCGCTTTCGATATATACGAGCATGATAATCAAAATGCAGTATCAACAAACACTTACACAGCGATATCTCCACCTAATCTCATGTATGAAGATGTTTGCAATCTTGCATTGGACAAAGATGCAGCCATCATCATTCTTCCATTTCATATAAGATGGTCAAGAGATGGTGGAGTTGAATCTGATGACAAGAAAGTACTAAGAGCATTGAACCGCAGAGTACTCGAAATTGCTCCATGTTCCGTTGGAATCCTTGTAACTCGTGCTAATTCAATGCCGAAACCAACACTAACAACATCAATAACATTAGAATATTCCACTACTCGATTAGCCATCATATATTTAGGTGGAAATGACGATGATGAAGAGGTCTTATGTTTAGCAAAACGAATGATGAATAATCCTAGGATCAACCTAGTTGTTTACTGTCTTGTTTCTAGGAAAAACATAGCAGAAGTGGAGGAGTTAATGGTAATTGGTGATGAAATGTTGGAAGAATTGAAACATGCTGAAAATGTGAGGTATCAAGAAGTTTTTACTGAGAATGGATCACAAACAGCATCTTTTCTACGTGAGATTGTGAACGAACATGATTTCTTTATAGTTGGGAGAAGACATGAAACTCAATATCCTCAAACCGATGGATTAGCAGAATGGAGTGAATTTCCAGAACTTGGTGCTATTGGTGATTTTCTTGCTTCACCTGATCTTAATAGTAATGCATCTGTTTTGTATGGACAGCTTCTTGGTCATCCTAGGCAAGCTTTATACATGCCGAGTTACCAACCTGCTGGGTTGATTCTAGGTGTCTCGTTTGAGCTAAAACCAATGGACACATACATGGACAAGTTATTTCCATATGGAACTCATGACGTAATTTCATCAATTTCATCATTAGGTATGATGTTCTTCGTTTTCATAAACGGTGTACAAATGGATTTCAGCTTGATAACAAGGACAGGAAAGAAAGCATGGATAATTTCAATAATTGGATTTTCTGTACCATTATGTGTTTTGTTTATACCATTACTAACATTGCCTGGAAAAGTTGAAGCCATTCAAAAAATAGATGGCGGCAATGGAATCTTGGTGGCAATGTTAACTCACAGTCTAAGTACATTTGGAACAATCGCTTCACTCCTAAGTGAACTTCAAATCCAAAACTCAGAGCTTGGTAGATTGTCTTTGTCCTCGGCTTTGGTCTGTGACATACTAACCGCGATTATTCAAAGCAATATTGTTGTTCTTGTGACTAGTCCTGATTCCACAACACTTTTGAGAAACTTATTCTTACTTTATATATTAATTGTATTAATTCCATTGGTATGTAGACCAATAATGTTTTGGATCATCAAACGTACACCAGAAGGAAGACCTGTGAAGGATAGTTACCTTTATGTTATCATTTCAATGGTTTTTGTTTTTGGCATTTTGTCAGTTAAGATTAATCAAGAATTTGCCATAGGAGCTTTCATTTTGGGACTGTCTGTTCCTGAAGGACCTCCTTTAGGATCTGCATTGGTTAAGAAGCTTCAGTTTTTTTGTACAACATTCTTTTTGCCAATCTTTGTAACCACTTGTGTGTTGAAAGCAGATTTTTCAATGGATGTTTCATCATCTGTTATGGTGTATACTGGTTTAGCGGTCCTTGTAACTCACTTGGTCAAAATGACAGCATGCTTTATAACTGCCCTTTGTTGCAAGATGCCTGTCACTGATGCTTTGTGTATTTCCCTCATTTTGAACACTAAAGGTGTGATCGAAGTTGGCATCTACAGTTCTGCATTTGACGATCAAATTATTAATAGGAAAACATTTGGAATGATGATGATAAGTATAATGATTATAGCAACCATTGTGCATTGGTCGGTGAAGTTATTATATGATCCATCGAGAAAATATGCTGGATACCAAAAAAGGAACATGATGGGCTTAAAAAGAAACTCAGAGCTAAGAATACTAGTAACACTTCAAAAACAGAACCATATTTCAGCAGCAACAAATTTCCTAGACTTATGTTGTCCAACACAAGAAAAACCAATCACAGTTGATGTTCTTCATGTAATTGAGCTTGTTGGAAGAGCCTTACCTCTTTTCATTCATCATCGCCTTCAAAGACAAGCATCAGGATCTACTTCATCTAAATCATACTCGGACAATGTTATCCTCGCTTTCGATATCTATGAGCATGATAACCAAAATGCAGTATCAATAAACACTTACACAGCAATATCTCCACCAAATCTCATGTTTGAAGATGTTTGTAATCTTGCATTGGACAAAGTTGCAACCATCATCATTCTTCCATTTCATATAAGATGGTCAAGTGATGGTGAAGTTGAATCTGATGACAAGAAAGTACTAAGAGCATTGAACCGGAGAGTACTTGAAATTGCTCCATGTTCCGTTGGAATCCTTGTAACTCGTGCTAATTCAATGCAGAAACCAACATCTATTAAATCAGAATATTCCACTACTCGATTAGCCATCATATATTTAGGTGGAAATGACGATGATGAAGAGGTCTTATGTTTAGCAAAACGAGCGATGAATAATCCTAAGATCAACCTAGTTGTTTACCGTCTTATTGCTAAGGAAAACATAGAAGAATTGGAGGAGTTCATGGTAATTGGTGATGAAATGTTGGAAGAATTTAAACATGCTGAAAATGTGAGGTATCAAGAAGTTTTCACTAAGAATGGATCACAAACAGCATCTTTTCTACGTGAGATTGTGAACGAACATGATTTCTTTATAGTTGGGAGAAGACATGAAACTCAATCTCCTCAAACTGATGGATTAGCAGAATGGAGTGAATTTCCAGAACTTGGTGCTATTGGTGATTTTCTTGCTTCACCTGATCTTAATAGTAGTGCATCTGTTTTGGTTGTGCAACAACAACTCTCACGCACGAATGACCTTAAAGGGTGGATTTTGTAG 4569 0.3616 MSINSNYTLFNEIKRLNGPIYNVCSEAPPHIVSDGLWGGYENGRRPMKSFLILFELQLVIIFALTQICSFLLKPLRLPQFLPEMIAGLILGVSFELKPLDTYMGKIFPYGTHDVISTISSLGMVIFVFINSVQMDFSLITRTGKRAWIISIIGLSVPLCVGFIPLLTLPGIVQAIQKLHGGNGVMVAMLSHSLSQFSTISSLLSELQIQNSELGRLTLSSALVCDILTTVISTNFVALMTSPDLTTLLRNIFLLYILFVLIPLVCRPIMFWIIKHTPEGRPVKDSYIYVIISMVFVLGILSVKINQEFVLGVFVLGLSVPEGPPLGSALVKKLQFFSTTFFLPIFVTTCVLKADFSMDFSSSMMVYTGLAVLVTHLVKMAALFITVLCCKIPVIDALCISLILNTKGVMEVGIYNSAFDDQVINRKIFGVMMISIMIIATIVHWSVKLLYDPSRKYAGYQKRNMMRLKRNSELRILVTLQKQNHISAATDFLDLCCPTQEKPITVDVLHVIELVGRALPLFIHHRLQRQALGSTSSKSYSDDVILAFDIYEHDNQNAVSTNTYTAISPPNLMYEDVCNLALDKDAAIIILPFHIRWSRDGGVESDDKKVLRALNRRVLEIAPCSVGILVTRANSMPKPTLTTSITLEYSTTRLAIIYLGGNDDDEEVLCLAKRMMNNPRINLVVYCLVSRKNIAEVEELMVIGDEMLEELKHAENVRYQEVFTENGSQTASFLREIVNEHDFFIVGRRHETQYPQTDGLAEWSEFPELGAIGDFLASPDLNSNASVLYGQLLGHPRQALYMPSYQPAGLILGVSFELKPMDTYMDKLFPYGTHDVISSISSLGMMFFVFINGVQMDFSLITRTGKKAWIISIIGFSVPLCVLFIPLLTLPGKVEAIQKIDGGNGILVAMLTHSLSTFGTIASLLSELQIQNSELGRLSLSSALVCDILTAIIQSNIVVLVTSPDSTTLLRNLFLLYILIVLIPLVCRPIMFWIIKRTPEGRPVKDSYLYVIISMVFVFGILSVKINQEFAIGAFILGLSVPEGPPLGSALVKKLQFFCTTFFLPIFVTTCVLKADFSMDVSSSVMVYTGLAVLVTHLVKMTACFITALCCKMPVTDALCISLILNTKGVIEVGIYSSAFDDQIINRKTFGMMMISIMIIATIVHWSVKLLYDPSRKYAGYQKRNMMGLKRNSELRILVTLQKQNHISAATNFLDLCCPTQEKPITVDVLHVIELVGRALPLFIHHRLQRQASGSTSSKSYSDNVILAFDIYEHDNQNAVSINTYTAISPPNLMFEDVCNLALDKVATIIILPFHIRWSSDGEVESDDKKVLRALNRRVLEIAPCSVGILVTRANSMQKPTSIKSEYSTTRLAIIYLGGNDDDEEVLCLAKRAMNNPKINLVVYRLIAKENIEELEEFMVIGDEMLEEFKHAENVRYQEVFTKNGSQTASFLREIVNEHDFFIVGRRHETQSPQTDGLAEWSEFPELGAIGDFLASPDLNSSASVLVVQQQLSRTNDLKGWIL* 1523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3086 1522 Gene3D - 790 1178 IPR038770 -
Mtr5g3086 1522 Gene3D - 53 457 IPR038770 -
Mtr5g3086 1522 PANTHER CATION/H+ EXCHANGER 3 807 1516 - -
Mtr5g3086 1522 PANTHER CATION/H+ EXCHANGER 3 12 790 - -
Mtr5g3086 1522 Pfam Sodium/hydrogen exchanger family 807 1163 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr5g3086 1522 Pfam Sodium/hydrogen exchanger family 59 443 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Mtr5g3086 1522 PANTHER CATION/H + ANTIPORTER 12 790 - -
Mtr5g3086 1522 PANTHER CATION/H + ANTIPORTER 807 1516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3086 Mtr-Chr5 39564040 39576151 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3086 23 787 Antiporter Super Family AT3G44900 36.080 4.65e-139 447
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3086 - - cam:101512648 1116.68