Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3085 ATGGGAAACACTTGCAGAAAACCAGTTTGTCATGATTCCTCACCAAGTTTATTTGGAAGTACAAATACTCAAAGTAACATAAAGCAGACTTCGGATTCTCCTGACCAGAAAACCGATTCGAAAACTTCATCATCAAATGATGACAAATCGATCTCTAAAGATGTTAAGTCCTTCAGCTTCAATGATCTAAAGGAGGCAACTAGGAACTTTCGGCAAGAAAATTTAATAGGGGAAGGAGGGTTTGGATTCGTCTACAAAGGATGGATAGATGAAAACACTGGTGCTCCAACAAAACCAGGAAATGGAATTGTAGTAGCCATTAAGAAGCTTAAGCCAGAAAGTTTTCAAGGCCACAAGGAATGGCTTGCAGAAGTCAATTATCTAGGCCAACTTCACCATGAAAATTTGGTGAAGCTTATTGGTTACTGTTCAGAAGGTAAAAACAGGCTTCTGGTTTATGAGTTTATGCAGAAAGGAAGTTTGGAAAATCACCTGTTCAGAAAAGGTGTTCAACCAATTTCCTGGATGACACGGATCAGTATTGCAATCGGTGTGGCAAGAGGACTAGCATTCTTACATTCCCTTGATGCAAATGTTATTTATCGTGATTTAAAGGCTTCCAACATCCTACTTGATTCGGATTTCAATGCGAATCTTTCCGATTTTGGCTTGGCAAGAGATGGTCCTACCGGAGATAACACTCATGTTTCAACTCGAATTATTGGAACTCATGGTTATGCTGCTCCAGAGTATGTAGCTACAGGTCATTTAACACTAAGGAGTGATGTATACAGCTTCGGCGTCGTCTTGTTAGAGTTACTAACAGGAAGGCGTGTAGTCGAAGATGATAGACAGGTATACACTGAAGAAACGTTGGTCGATTGGGCAATGCCTTTCCTGAGTGACAGCAGAAGAATATTGAGAATCATGGATACAAAGTTAGGCGGTCAATACTCAAAGAAAGGAGCTCAAGCTGCAGCTGCGCTTGTTCTAAAGTGTCTTAATACTGATCCTAAACATAGACCAACCATGGTAAATGTTCTAGCTGCATTGGAAGCATTACACTCCTCAAATTCATTTCCAAAGAAACCAAAATCTGGAACTGATAATCATAACTCAGTCCCAAGGACACCGAAATCTGGAACTGAAAATCATCATCCAACCAAGCATTCTAGTCATCATCATTTACATAAGTCAATTGCCAATACTACTAGAAAACATTGA 1224 0.3979 MGNTCRKPVCHDSSPSLFGSTNTQSNIKQTSDSPDQKTDSKTSSSNDDKSISKDVKSFSFNDLKEATRNFRQENLIGEGGFGFVYKGWIDENTGAPTKPGNGIVVAIKKLKPESFQGHKEWLAEVNYLGQLHHENLVKLIGYCSEGKNRLLVYEFMQKGSLENHLFRKGVQPISWMTRISIAIGVARGLAFLHSLDANVIYRDLKASNILLDSDFNANLSDFGLARDGPTGDNTHVSTRIIGTHGYAAPEYVATGHLTLRSDVYSFGVVLLELLTGRRVVEDDRQVYTEETLVDWAMPFLSDSRRILRIMDTKLGGQYSKKGAQAAAALVLKCLNTDPKHRPTMVNVLAALEALHSSNSFPKKPKSGTDNHNSVPRTPKSGTENHHPTKHSSHHHLHKSIANTTRKH* 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3085 407 MobiDBLite consensus disorder prediction 14 40 - -
Mtr5g3085 407 PANTHER OS01G0588500 PROTEIN-RELATED 17 368 - -
Mtr5g3085 407 MobiDBLite consensus disorder prediction 359 381 - -
Mtr5g3085 407 PANTHER TYROSINE KINASE FAMILY PROTEIN 17 368 - -
Mtr5g3085 407 Gene3D Phosphorylase Kinase; domain 1 44 155 - -
Mtr5g3085 407 Gene3D Transferase(Phosphotransferase) domain 1 156 374 - -
Mtr5g3085 407 MobiDBLite consensus disorder prediction 388 407 - -
Mtr5g3085 407 ProSiteProfiles Protein kinase domain profile. 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3085 407 MobiDBLite consensus disorder prediction 1 51 - -
Mtr5g3085 407 SMART serkin_6 70 354 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3085 407 ProSitePatterns Serine/Threonine protein kinases active-site signature. 199 211 IPR008271 GO:0004672|GO:0006468
Mtr5g3085 407 CDD STKc_IRAK 76 354 - -
Mtr5g3085 407 SUPERFAMILY Protein kinase-like (PK-like) 45 352 IPR011009 -
Mtr5g3085 407 MobiDBLite consensus disorder prediction 357 407 - -
Mtr5g3085 407 Pfam Protein tyrosine and serine/threonine kinase 73 350 IPR001245 GO:0004672|GO:0006468
Mtr5g3085 407 ProSitePatterns Protein kinases ATP-binding region signature. 76 109 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3085 Mtr-Chr5 39557160 39560052 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3085 8 351 Glycoside Hydrolase AT3G07070 48.000 1.84e-103 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Mtr5g3085 PK_Tyr_Ser-Thr 6.9e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3085 - - gmx:102664409 617.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g0973 3 15362277 15365842 Mtr5g3085 5 39557160 39560052 PCT