Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3076 ATGACTGGAAATACATTTGTGGACTACGAATCTACGATACATATGGAACATGTTAATATTCCCTATGACAAACCGTGCATCATTTTAGAAGGATCTGACAGAAAAACCACAACAATTACTTATGGTGATGAGAATATTGCAACACCAACATTCTTTTCATTTCCACCTAATGTGATTTTGAGTGGTATTACATTTGAGAATACATTTGGAAATAGCGAACCAGCAGTAGCTGCTATTATAAATGGTGATAAATCTGCTGTATTTAACTGTGGTTTCTTAGGTTATCAAGATACTTTGTTTGATGCAATGGGACGTCATTATTATAAAAATTGTTATATTCAAGGTGAAGTTGATTTCATTTTTGGTGAAGCCCAGTCTTATTTTGAGGAATGTGTGATAAATGCAACACAAGATAGTTCTAAACCTCCAGGTTTTATCACAGCACAACGTAGGAATTCATCAACCGAACCATCTGGTTTTGTTTTTAGAGGAGGAGAAGTTACTGGGATTGGTAAAGTGAATTTAGGAAGAGCATATGGCCCTTATTCAAGAGTTATATTTTGGGAAACATACCTTTCTTCAGTGGTACTTTCAGGAGGATGGGATCCTTGGAAATATGGAGGCCATGAAAAGAACTTCATCTATGCTGAAGTGGATTGTACTGGACCAGGATCTAATACTCAAGGGCGTGTACCATGGGAGAAGAAGCCGAATGAAATAAATATAAATGATTATTCTTTATCATCTTTCATAAATGAAGATAGATGGCTTAACAATATACCAACTATACAGAAAAAGGATTATTCTTGA 810 0.3519 MTGNTFVDYESTIHMEHVNIPYDKPCIILEGSDRKTTTITYGDENIATPTFFSFPPNVILSGITFENTFGNSEPAVAAIINGDKSAVFNCGFLGYQDTLFDAMGRHYYKNCYIQGEVDFIFGEAQSYFEECVINATQDSSKPPGFITAQRRNSSTEPSGFVFRGGEVTGIGKVNLGRAYGPYSRVIFWETYLSSVVLSGGWDPWKYGGHEKNFIYAEVDCTGPGSNTQGRVPWEKKPNEININDYSLSSFINEDRWLNNIPTIQKKDYS* 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3076 269 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 9 263 - -
Mtr5g3076 269 SUPERFAMILY Pectin lyase-like 13 260 IPR011050 -
Mtr5g3076 269 Gene3D - 9 267 IPR012334 -
Mtr5g3076 269 Pfam Pectinesterase 11 253 IPR000070 GO:0030599|GO:0042545
Mtr5g3076 269 PANTHER PECTINESTERASE 9 263 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3076 Mtr-Chr5 39483526 39486801 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3076 13 210 Carbohydrate Esterase AT2G19150 46.190 4.97e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3076 - - mtr:MTR_5g088290 539.65