Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3075 ATGGACGGGGAAAATGTTAATATTCCCTATGACAAACCGTGCATCATTTTAGAAGGATCTGACAGAAAAACCACAAAAATTACTTATGGTGATGGGAAAGCAACAACAACATTCTTTTCATTTCCACCTAATGTGATTTTGAGTGGTATTACATTTGAGAATACATTTGGAAATGAAGGACCAGCAATAGCTGCTATTATAAATGGTGATAAATCTGCTGTTTTTGACTGTGGTTTTTTAGGTTATCAAGATACTTTGTTTGATGCAACGGGGCGTCACTATTTTAAGAATTGTTATATTCAGGGTGAAGTTGACTTCATTTTTGGTGAAGCCCAATCTTATTTTGAGGAATGTGTGATAAACGCAACACAAGATAGTTCTAAACCTCCAGGTTTTATCACAGCACAACGTAGGAATTCATCAACCGAACCATCTGGTTTTGTTTTTAGAGGAGGAGAAGTTACTGGGATTGGTAAAGTGAATTTAGGAAGAGCATATGGCCCTTATTCAAGAGTTATATTTTGGGAAACATACCTTTCTTCAGTGGTACTTTCAGGAGGATGGGATCCTTGGAAATATGGAGGCCATGAAAAGAACTTCATCTATGCTGAAGTGGATTGTACTGGACCAGGATCTAATACTCAAGGGCGTGTACCATGGGAGAAGAAGCCGAATGAAATAAATATAAATGATTATTCTTTATCATCTTTCATAAATGAAGATAGATGGCTTTCCAACATACCACCTATACATAAAAACCATGTTTAG 768 0.3646 MDGENVNIPYDKPCIILEGSDRKTTKITYGDGKATTTFFSFPPNVILSGITFENTFGNEGPAIAAIINGDKSAVFDCGFLGYQDTLFDATGRHYFKNCYIQGEVDFIFGEAQSYFEECVINATQDSSKPPGFITAQRRNSSTEPSGFVFRGGEVTGIGKVNLGRAYGPYSRVIFWETYLSSVVLSGGWDPWKYGGHEKNFIYAEVDCTGPGSNTQGRVPWEKKPNEININDYSLSSFINEDRWLSNIPPIHKNHV* 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3075 255 SUPERFAMILY Pectin lyase-like 4 245 IPR011050 -
Mtr5g3075 255 Pfam Pectinesterase 4 240 IPR000070 GO:0030599|GO:0042545
Mtr5g3075 255 PANTHER PECTINESTERASE 3 250 - -
Mtr5g3075 255 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 3 250 - -
Mtr5g3075 255 Gene3D - 3 252 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3075 Mtr-Chr5 39475946 39478761 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3075 4 197 Carbohydrate Esterase AT2G19150 46.377 7.75e-52 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3075 - - mtr:MTR_5g088290 494.197