Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3069 ATGGCTATGATGTGGAGCATGGCAAAATCTGTGCGTCACGATGTTGGAGGGGATGACCATGGATGGAACACCAATATTAACATGACAAAATGGTCATCGGACAAACACTTTCATTTGAATGAATGGCTATTCTTTGGATATGATAGGCATTTCTTCAGTGTGTTGGAGGTGAACAAGACAAGCTATGAAAACTGCATAGATAGTGGATTCATCAAGAACATAACAACAGGTGTCGGAAGAGAAGTTTTTCAGTTGAGTGAGGCCAAGACCCATTACTTCATAAGCGGAGGAGGTTTCTGTCAGCGCGGAGTGAAGGTCGCAATCGATGTTAATGAACATGTTGCACCAGCTCCTCAGCCTACTCCCCACAAAAGTTCAGCGACTTCAAACATTCAAATCTACCACTCACTTGCTGTGCTCATCTTAATCTTCATGTGCACCAACTTCTTGGTATAA 456 0.4298 MAMMWSMAKSVRHDVGGDDHGWNTNINMTKWSSDKHFHLNEWLFFGYDRHFFSVLEVNKTSYENCIDSGFIKNITTGVGREVFQLSEAKTHYFISGGGFCQRGVKVAIDVNEHVAPAPQPTPHKSSATSNIQIYHSLAVLILIFMCTNFLV* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3069 151 SUPERFAMILY Cupredoxins 12 110 IPR008972 -
Mtr5g3069 151 ProSiteProfiles Phytocyanin domain profile. 11 112 IPR003245 GO:0009055
Mtr5g3069 151 Pfam Plastocyanin-like domain 22 103 IPR003245 GO:0009055
Mtr5g3069 151 Gene3D - 10 115 IPR008972 -
Mtr5g3069 151 PANTHER OS03G0758500 PROTEIN 3 144 - -
Mtr5g3069 151 PANTHER BLUE COPPER PROTEIN 3 144 IPR039391 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3069 Mtr-Chr5 39411733 39413067 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3069 8 151 Phytocyanin Superfamily AT2G27035 39.865 2.19e-35 119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3069 - - mtr:MTR_5g088180 321.242