Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3060 ATGGAGGTTTTTAGGTTTAACAAAACAATGTTGTTAATGATGATTATGACGGCTATGATGTGGAACATGGCAAAAGCTGAGGAGCATTTTGTTGGAGGGGGAAAGCAAAGATGGATCCCTGGTAATAACTTGACAAAATGGTCCTTGAATGAGCACTTTCGTGTGAATGATTGGTTATTCTTTGGATATGGAGAAGAATATCAAAAGTACCTTTACCATGTGCTGGAGGTGAACAAGACAAGCTATGAAAACTGCATAGATACAGGGTTCATCAAGAACATAACAAGGGGCGGTGGAAGAGATGTTTTTCTGCTAACTGAGGCCAAGACCTATTACTTCATAAGCGGAGGAGGTTTCTGTCAGCGCGGAGTGAAGGTCGCAATCGATGTTAATGAACATGTTGCACCAGCTCCTCAGCCTACTCCCCACAAAGGTTCAAATGCTTCAAACATTTAA 456 0.4167 MEVFRFNKTMLLMMIMTAMMWNMAKAEEHFVGGGKQRWIPGNNLTKWSLNEHFRVNDWLFFGYGEEYQKYLYHVLEVNKTSYENCIDTGFIKNITRGGGRDVFLLTEAKTYYFISGGGFCQRGVKVAIDVNEHVAPAPQPTPHKGSNASNI* 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3060 151 PANTHER BLUE COPPER PROTEIN 9 137 IPR039391 GO:0009055
Mtr5g3060 151 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Mtr5g3060 151 Pfam Plastocyanin-like domain 42 123 IPR003245 GO:0009055
Mtr5g3060 151 Gene3D - 25 135 IPR008972 -
Mtr5g3060 151 PANTHER OS03G0758500 PROTEIN 9 137 - -
Mtr5g3060 151 ProSiteProfiles Phytocyanin domain profile. 27 132 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3060 Mtr-Chr5 39357619 39364668 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3060 10 150 Phytocyanin Superfamily AT2G27035 39.007 3.85e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3060 - - mtr:MTR_5g088180 209.92