Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3059 ATGGAGGTTTTTAGGTTTAACAAAACAATGTTGTTAATGATGATTATGACGGCTATGATGTGGAACATGGCAAAAGCTGAGGAGCATTTTGTTGGAGGGGGAAAGCAAAGATGGATCCCTGGTAATAACTTGACAAAATGGTCCTTGAATGAGCACTTTCGTGTGAATGATTGGTTATTCTTTGGATATGGAGAAGAATATCAAAAGTACCTTTACCATGTGCTGGAGGTGAACAAGACAAGCTATGAAAACTGCATCGATACAGGATTCATTAAGAACATATCAAGGGGTGGCAGACAAGACGTTTTTCAGCTGACTGAAGACAAGATCTATTACTTCATAAGTGGAGGAGGTGGCTGTTGGAGTGGATTGAAGGTTGCAATTGATGTTAATGAATATGTTGCACCAGCTCCTCAACCTACTCCCCACAAAGGTGGCACAGATGCTTTAAACATTCAAATCTACCACTCACTTGTGGTACTCATCTTAACCTTGATTTGCACCATTCTCTTGGTATAA 519 0.4008 MEVFRFNKTMLLMMIMTAMMWNMAKAEEHFVGGGKQRWIPGNNLTKWSLNEHFRVNDWLFFGYGEEYQKYLYHVLEVNKTSYENCIDTGFIKNISRGGRQDVFQLTEDKIYYFISGGGGCWSGLKVAIDVNEYVAPAPQPTPHKGGTDALNIQIYHSLVVLILTLICTILLV* 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3059 172 SUPERFAMILY Cupredoxins 26 130 IPR008972 -
Mtr5g3059 172 Pfam Plastocyanin-like domain 42 123 IPR003245 GO:0009055
Mtr5g3059 172 ProSiteProfiles Phytocyanin domain profile. 27 132 IPR003245 GO:0009055
Mtr5g3059 172 Gene3D - 25 135 IPR008972 -
Mtr5g3059 172 PANTHER BLUE COPPER PROTEIN 9 164 IPR039391 GO:0009055
Mtr5g3059 172 PANTHER OS03G0758500 PROTEIN 9 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3059 Mtr-Chr5 39351234 39353094 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3059 9 142 Phytocyanin Superfamily AT2G27035 40.299 1.67e-29 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3059 - - mtr:MTR_5g088180 193.741