Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3045 ATGGCCATGGAAGATAAGCCTGCTGCGCCAACAAGTGAAGGCCAACAATCCATAAGATGTAAAGCTGCGGTTTGTCGCAAACCAGGTGAGCCACTGATTATTGAGGAGATTTTTGTGGCACCACCAATGCCACATGAAGCTAGGATTCGTATTATATGCACCTCTCTTTGTCACAGTGATATTATTTTTTGGAAAATGCAGGAGCCTCCTGCAATTTTTCCAAGGATATTGGGTCATGAGGCAATTGGGGTTGTGGAAAGTGTTGGAGAGGGAGTAACAGAAGTTACAAAAGGAGACATTGTTATCCCAATCTTCATGGCTGATTGTGAAGAGTGCATAGATTGCAAATCAACAAAGAGCAACCTTTGTTCAAAGTTTCCTTTTGATGTTAAACCTTGGATGCTTAGATATGATACCACCAGATTCACTAATCTAAATGGAGAGATTATAAACCATTTCATATTTGTCTCGAGTTTTAGCGAGTACACTGTGGTTGACACTGCCAATCTACTCAAGATTGATCCAGCAATTCCTCCCAACAGGGCATGCCTCCTCAGTTGTGGTGTATCAACAGGGGTAGGTGCTGCATGGAAAACAGCAAATGTTGAACTAGGGTCGACAGTAGCTATTTTTGGACTCGGATGTATTGGATTAGCGGTTGCTGAGGGAGCTAGACTTTGTGGAGCAACTAGGATTATAGGTGTGGATATCAAGCCAGAAAAATTTGAAATTGCAAAGAAGTTTGGAGTCACAGACTTTGTAAATCCTGGAGAATTGGAAAACAAATCTGTGAGTCAGGTTATCATAGAGATGACTGGTGGGGGAGCAGATTATTGCTTTGAATGTGTTGGTATGGCATCATTGGTGCATGAAGCATATGCTTCATGTAGAAAGGGTTGGGGAAAAACAATTATGTTAGGAGTGGACAAGCCAGGATCTAAGTTGAGTATCAATAGTACTGACGTCCTTTTTCAAGGGAAGACTCTTATGGGGTCTATATTTGGAGGACTCAAACCCAAGTCTGATGTACCCATTCTTTTTAAACGCTACATGGACAAGGAACTCAATTTGGATGATTTTGTTACACATGAGGTGGAATTTAAAGACATCAACAAGGCTTTTGATTTGTTGACTAAAGGAGAGTGTCTTCGAAGTGTGATTTGGATGGACAAATAA 1176 0.4116 MAMEDKPAAPTSEGQQSIRCKAAVCRKPGEPLIIEEIFVAPPMPHEARIRIICTSLCHSDIIFWKMQEPPAIFPRILGHEAIGVVESVGEGVTEVTKGDIVIPIFMADCEECIDCKSTKSNLCSKFPFDVKPWMLRYDTTRFTNLNGEIINHFIFVSSFSEYTVVDTANLLKIDPAIPPNRACLLSCGVSTGVGAAWKTANVELGSTVAIFGLGCIGLAVAEGARLCGATRIIGVDIKPEKFEIAKKFGVTDFVNPGELENKSVSQVIIEMTGGGADYCFECVGMASLVHEAYASCRKGWGKTIMLGVDKPGSKLSINSTDVLFQGKTLMGSIFGGLKPKSDVPILFKRYMDKELNLDDFVTHEVEFKDINKAFDLLTKGECLRSVIWMDK* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3045 391 SUPERFAMILY GroES-like 340 388 IPR011032 -
Mtr5g3045 391 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 78 92 IPR002328 GO:0008270|GO:0016491
Mtr5g3045 391 Gene3D - 23 384 - -
Mtr5g3045 391 SUPERFAMILY GroES-like 16 206 IPR011032 -
Mtr5g3045 391 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 14 388 - -
Mtr5g3045 391 PANTHER ALCOHOL DEHYDROGENASE 14 388 - -
Mtr5g3045 391 Pfam Zinc-binding dehydrogenase 216 336 IPR013149 -
Mtr5g3045 391 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 177 352 IPR036291 -
Mtr5g3045 391 Pfam Alcohol dehydrogenase GroES-like domain 44 173 IPR013154 -
Mtr5g3045 391 Gene3D - 192 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3045 Mtr-Chr5 39226163 39229660 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3045 46 213 Monolignol Biosynthesis Gene Families AT4G37970 26.036 7.13e-11 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3045 K00121 - gmx:100806887 637.106
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2513 3 39112065 39115358 Mtr5g3045 5 39226163 39229660 PCT