Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3040 ATGGATGTTCATGTGATAACTATCGGAGAAGGAAGTGGATCGATGGAACATAATGTGGATGCTGAATTTGGTCAAGTTAATGATGCTGGAAACTCGGGATCTCATGCTGAGGGTATGGTTTCGGAGCCGTATTTGGGCATGGTATTTGATTCTGAAGATTCTGCTAAAAGTTTTTATAGTGACTATGCTAGACGGTCGGGTTTCAGCTCAAAAGCTGGTTTGCATGGTCAGTTTAATGCTGATGGGACAAATATGTTCCGGGAGTTTGTGTGTAGTAGGGAAGGTTTGAAAAGAAGGATGACTGAAAGTTGCGAGGCGATGATTAGGATAGAGCAAACGGGTCAAAATAAGTGGGTTGTTACAAAATTTGTGAAGGAACATAGCCATTCTCTGGCGGTACCTGATAAGGTGGAAAAACTTCAACTGGTGAAGCACTTTTCTAGTGTTGGAAGAACCATGCCTGAAACTTACAAAGGACTGGGGCTTGTTCCAACTGGTGTCATGTATATATCTATTGATGCTCATCACGTTTCCTCTGACAATAGTCAGAAGATTAGGAATTCTCCTGCAGCTGCTGCGAAAACGAGTCATCCAGTTAAAAATTCCACTTCGATGCCTTATAATGCGAGGCAACCCATTAAAAAGAAGACATTAGGGAGGGATGCTCGGGACCTGCTGGAGTATTTTATGAAAGTGCAGGCTGAAAACCCTGGTTTCTTCTATGCAATACAACTTGATGAAGATAATCGTATGTCTAATGTGTTTTGGGCAGATGCAAGATCAAGGACAGCTTACAGTCATTTTGGTGATGCAGTTACCCTGGACACAACACATAGAGCAAATCAATATAATGTGCCATATGCTCCATTCACTGGGATAAACCATCATGGTCAAATGATTTTGTTTGGTTGTGCACTCATTTTTGATGATTCTGAGGCTTCTTTTTGTTGGCTCTTCAAGACATTTCTAGCAGCTATGAATGACCGTCACCCTCTCTCTATAACTACCGATCAGGACAGATGCATACAAACAGCAGTATCACAAGTTTTTCCCCAAGCACGTCACTGCATAAACAAACGTTATGTCTTGCGAGAAGGCCATGAAAAATTGGGCCATGTATGTCGCATGCATCCTTATTTTCACTATGAACTCTATAATTGCATTAACCTGACAGAAACAATTGAGGAGTTTGATTTTTCTTGGAATTCTATCATAGACAAATATGAACTCAGAGGGCATGATTGGCTTCAGTCCTTGTATAGTGCTCGTGATCAATGGGTTCCAGCATATTTCCGTGATTCATTTTTCGCTGTAATATCTCCTAATCAAGGATTTGAAGCCTCTTTTTTGGACGGTGTTGTCAACCGGCATACAACATTACCAATGTTCTTTAGGCAGTATGAACTAGCTTTGGAGAAATGGTTTGAAAAGGAAATAGAATCAGATTTTGAGACAATTAGCACTAATCCAGTTCTAAAGACACCTTCGCCAATGGAGAATCAGGTTGCTAAGCTTTATACACAGAGAATATTTTTGAAGTTTCAAGAAGAGCTAGTTGAAACTTTTGCTTATACCGCCAACAGAATCGAAGAGGATGGGGTGAATAGCATATTTGGAGTTGCAAAGTTTGATGATGTCGAAAAGTCGTACACTGTCACATTAAACCAGTCTGAATTGAGAGCTAACTGTACATGCCAAATGTTTGAATTTTCAGGCATTCTTTGTAGGCACATTTTAACTGTTTTTACCGTGTCTAATGTATTCACTATACCATCCCACTACATCTTAAAACGGTGGACAATGGAAGCAAAAAACAGTAATGTATTGGATGAATGTGGTGGTGAATCACTTGCATATGAGTCTTTGACATCACGGTATGCCAATCTGTGCCGGGAAGCCATCAGATATGCTGAGGAAGGTGCTGTAGCTATGGAAACTTATGATGCTGCAATGAGTGGTCTTAGAGAAGGTGGAAAGAAAGTTGATGTCATGAAGAGAAATATTGCCAAAGTGTCATCAACTAATCATCGACTCAGCGGGAATGATTGCTCCGATCCCGACAAGAAAACCCCTACTTCAACATCAGATACAAGTACAGCCCCTCTTTTATGGCCACTTAACGATGAAACATCGACGTTTAATCTTAATGACGTCGATGCTCCTGTTCAACCAATGGCTGATCTGAATTTACCACAAACGACCCCAGTGCCACGTAAGCAAGTTGATGTTCCATCCCCAGTGCCTCGTCAGCGAGTTGATAGTCCATCCTCAGTGCCTCGTCAGCGAGTTGATGGTCCACGACCAGTGCCTCGTAGGCGAGTTGATGGTCCATCCCCAATGCCTCGTCAGCGAGATGATGGTCCTCCCCCAGCGCCTCTTCAGCAAGATGATGGTCCACCTGAAAACACGGTGGCTCTTCCATCTTTGAAGTCAATGACGTGGGTAATGGAGAACAAAACCTCAAATCCAGAGAACAGAATAGCTGTTGTCAATCTCAAGTTGCAAGATTATAACAAGAGTCCATCAACAGAATATGAGGTTAAGTTCCATCTCTCTCGGGTTACTGTGGGACCTGTTTTGAAGTCTATGGCTGAAGTCGGGGAGCAACTTTCAACAACAGCTAATAAGGTTGCTGTAATAAATCTCAAGCTTGATAATGCCCGGGTTTCTGGTGAGTCTGAAGTTAAGTTTCAAGTATCCAGGGATGCATTGGGTGCTGTGCTACGATCAATGGCTTATATCCGCGAGCAACTTTCTTGTGCTGGCGACGCGAACTCAGAACCTATGTCGAAAAAGCGTCGAAACTGA 2808 0.4234 MDVHVITIGEGSGSMEHNVDAEFGQVNDAGNSGSHAEGMVSEPYLGMVFDSEDSAKSFYSDYARRSGFSSKAGLHGQFNADGTNMFREFVCSREGLKRRMTESCEAMIRIEQTGQNKWVVTKFVKEHSHSLAVPDKVEKLQLVKHFSSVGRTMPETYKGLGLVPTGVMYISIDAHHVSSDNSQKIRNSPAAAAKTSHPVKNSTSMPYNARQPIKKKTLGRDARDLLEYFMKVQAENPGFFYAIQLDEDNRMSNVFWADARSRTAYSHFGDAVTLDTTHRANQYNVPYAPFTGINHHGQMILFGCALIFDDSEASFCWLFKTFLAAMNDRHPLSITTDQDRCIQTAVSQVFPQARHCINKRYVLREGHEKLGHVCRMHPYFHYELYNCINLTETIEEFDFSWNSIIDKYELRGHDWLQSLYSARDQWVPAYFRDSFFAVISPNQGFEASFLDGVVNRHTTLPMFFRQYELALEKWFEKEIESDFETISTNPVLKTPSPMENQVAKLYTQRIFLKFQEELVETFAYTANRIEEDGVNSIFGVAKFDDVEKSYTVTLNQSELRANCTCQMFEFSGILCRHILTVFTVSNVFTIPSHYILKRWTMEAKNSNVLDECGGESLAYESLTSRYANLCREAIRYAEEGAVAMETYDAAMSGLREGGKKVDVMKRNIAKVSSTNHRLSGNDCSDPDKKTPTSTSDTSTAPLLWPLNDETSTFNLNDVDAPVQPMADLNLPQTTPVPRKQVDVPSPVPRQRVDSPSSVPRQRVDGPRPVPRRRVDGPSPMPRQRDDGPPPAPLQQDDGPPENTVALPSLKSMTWVMENKTSNPENRIAVVNLKLQDYNKSPSTEYEVKFHLSRVTVGPVLKSMAEVGEQLSTTANKVAVINLKLDNARVSGESEVKFQVSRDALGAVLRSMAYIREQLSCAGDANSEPMSKKRRN* 936
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3040 935 MobiDBLite consensus disorder prediction 670 705 - -
Mtr5g3040 935 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 790 860 IPR031052 GO:0006355
Mtr5g3040 935 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 737 IPR031052 GO:0006355
Mtr5g3040 935 MobiDBLite consensus disorder prediction 180 207 - -
Mtr5g3040 935 Pfam FAR1 DNA-binding domain 57 132 IPR004330 -
Mtr5g3040 935 MobiDBLite consensus disorder prediction 725 805 - -
Mtr5g3040 935 Pfam SWIM zinc finger 550 583 IPR007527 GO:0008270
Mtr5g3040 935 Pfam MULE transposase domain 272 357 IPR018289 -
Mtr5g3040 935 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Mtr5g3040 935 SMART 26again6 561 588 IPR006564 GO:0008270
Mtr5g3040 935 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 32 737 - -
Mtr5g3040 935 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 790 860 - -
Mtr5g3040 935 MobiDBLite consensus disorder prediction 782 796 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3040 Mtr-Chr5 39191858 39197920 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Mtr5g3040 MULE 1.3e-19 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3040 - - gmx:100786516 1178.7
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g2585 3 39820596 39826349 Mtr5g3040 5 39191858 39197920 PCT