Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3024 ATGACTAGAATTTGTTGTAGTAGTAGAATTATCAAACTCTTGTTGATTGTTTCCTTCTTGCATGGTGGTTTTGCACTTACCACTGATGGGTTGACTCTGTTGTCACTCTTGACTCACTGGACCTTTGTTCCTCCTCTCATCAACTCTAGTTGGAAAGCTTCTGATTCAATTCCATGCTCATGGGTTGGTGTTCAATGTGACCATACCAACAATGTCATTTCCATTAATCTCACTAACCATGGGATTCTTGGTCAACTTGGACCAGAAATTGGAAACTTTTATCACTTGCAGAACCTTGTATTGTTGGGTAATGGTTTCACAGGAAATGTCCCTTCAGAGTTAAGCAATTGTAGTTTGCTTGAGTATTTAGACCTTTCTAAGAATAGATTCAGTGGAAAGATACCATATAGTTTGAAAAAGTTGCAAAATTTAAAGGTTATAGGACTGTCTTCCAATCTGCTGACTGGTGAAATTCCAGATTCATTGTTTGAAATTCATTCCCTCGAAGAAGTGAGCCTACACAGTAACCTTCTCAGTGGCCCTATCCCAACAAATATTGGAAACTTGACTCATCTATTGAGGTTGTATCTACATCGTAATATGTTTTCAGGGACTATTCCTTCAGCTATTGGTAATTGTAGTAAACTAGAGGACCTTAACTTATCTTTCAACCGTTTGAGAGGTGAAATTCCGGTCTTTGTTTGGAGAATACAAAGTCTTTTGCACATCTTGGTTCACAACAACAGCCTCTCTGGAGAACTACCTTTTGAGATGACAGAGCTCAAGTATCTAAGAAATATCTCATTGTTTGATAATCAGTTCTCAGGAGTCATACCTCAAAGCTTGGGAATCAACAGCAGTATAGTGAAGTTGGACTGTATGAATAACAAGTTCAATGGCAATATCCCACCCAATCTTTGCTTTGGAAAGCATTTGTTAGAGCTCAATATGGGAATCAATCAACTACAAGGTGGCATACCTTCTGATCTTGGAAGATGCGCAACTCTAAGGAGGTTGTTTCTCAATCAAAATAATTTCACCGGGTCGCTTCCTGATTTTGCAAGTAATCTTAACCTGAAATACATGGACATAAGCAAGAACAATATCAGCGGGCCAATTCCATCGAGTTTGGGAAATTGCACAAATCTGACATACATTAATCTGTCAAGGAACAAATTTGCACGACTTATACCATCAGAGTTGGGAAACCTATTGAATCTTGTGATTTTGGAACTTTCTCACAACAACTTGGAAGGTCCTCTGCCACATCAGCTGTCAAACTGTAGTCACATGGATCGTTTTGATATAGGATTCAATTTCCTAAATGGATCACTCCCATCAAATTTGAGAAGTTGGACAAACATAACCACATTGATTTTAAGAGAAAATTACTTCACAGGAGGTATCCCAGAGTTTTTAGCTAAATTTAGAAACCTTCGTGAGTTACAACTTGGTGGAAATTTGCTTGGAGGAAAAATTCCTCGATCGATTGTAACATTGCGTAATTTGTTCTATGGGTTGAATTTGAGTGCTAATGGATTGATAGGTGGCATTCCTGTAGAAATTCAGAAACTAAAAATGCTGCAAAGTCTGGATATATCCTTGAACAATTTGACGGGAAGCATAGACGCACTTGGAAGTCTTGTTTCATTAATTGAGGTCAATATTTCTCACAATCTCTTCAATGGTTCTGTACCAACAGGTCTAATGAAGTTATTGAATTCCTCACCATCATCATTCATGGGTAATCCTCTCATATGTGTCAGTTGTTTAAGTTGCATTAAAACTAGTTATGTAAATCCATGTGTCTCCAAATCAACCGATCACAAAGGTATCAGTAATGTTCAAATTGTGATGATTGAAATTGGATCCTCTATATTGATTTCTGTTGTGCTGGTAATAATAATTCAAAGGCGTTTCCTTAGAAAGGAATCAGATACGGAAGATCTAAAGCAATGGTATATTGGTAGGGGAGCTGGATTGATTGGAACCAGATATGCTTACGAATTCAACGTATCAGGTGAAGATAAACCACCTGACCTTCAGAAACTAGTGTTGCAGGCTACAGAGAACCTAAGTGATCAATATATTATTGGAAGAGGAGCACATGGTATTGTGTACAAAGCTTTGCTTGGTCAACAGGTTTATGCTGTAAAGAAGTTTGAATTCACAAGCAACAGGGTAAAGCGGCTACGTATGATGTGCAATGAAATTGAAGTGCTTGGAATGTATAAGCATCGAAACGTGATCAAATACGCTGACTACTGGATTGGAAAGGACTATGGTTTAGTCTTGTATGAATTCATGAAAAATGGAAGCCTTCATGATATTTTGCATGAGAAGAAACCTCCACCACTCTTTACGTGGAGTGACCGGCTTAAGATTGTTGTTGGAATTGCTGAAGGACTAGCATATCTGCATAATGATTGTGACACACCGATAGTGCACCGAGACATTAAACCAAAAAATATTCTTATTGATGACAATCTAGAGCCAATTATAGCTGATTTTGGTACCGTCTTATACAGGAAGTTGTCTGAAGATTCTTATGGTCATTCAGAAACCAGGAAAATGCGTTCATCGATCGTTGTTGGTACCCCTGGCTATATTGCACCAGAGAATGCATATGCAATAGTGCAAAGCAGAAAGTCTGATGTATATAGCTATGGAGTTATTTTGCTTGAGATAATAACAAGAAAGAAGGTGGTAGTTCCCTGTTTGAATGATGATACAAATGTGACCTCTTTAGTGAGCTGGGCTAGATCTGTATGGCTGGAAACAGGCAAAATTGAGTACATTGCTGATTCATACCTTGCAAGAAGATTTCCCAATTCAGCTGCGCTGACCAGGCAAGTCACTACAATGTTTTTATTGGCATTGCAATGTACAGAGAAGGATTTACGAAAGAGACCAATCATGAAAGATGTTATTGGTTTGTTTAAAATGCACTTGTTTAAGCGGTGTGACGAGGAAGAATATGGTGATGCGGTTGCAGCTAATATGCTCCCTAACATTCCATTTGTCAGCATTGACCACAATCTACATGGAGAAAGCAGTAGGGCAGCTGCCCAAAGACAAAGAGAAGTTATATTTAATATGGAGACGGATCCTATGGATTATTATAGTGACTTTGGCTTTTGGCAGGACACTGAACATGAACCTATGGATTATTATAGTGACTCTAGCTTTTGGCATGACATTGATCAATTTCTATCTGGATTCGGTGTTGAAGATGATTGGAATCTCAAACCAACAATTTGTATTGATGGGCTTTTAGTTAAACTGATGGGAAATGGTAAGATAATAGCTGAAAAGCTTGTGAAGGTAGCTGCTCTGAATGTTCCAAAAGTAACCTATGTTTGGCCTTGTTTGATTTTCCTTCCCTCTGGCGTTGGTCCAGTAGTTACCAAACCTTTCAATTGGTTTTTTCTCTCACGTTGGGGCCAATATATGCACCTTCAACAATCCTTGTATTATCAACCCAAATCATACTTCTTAAATGCCAATAAAATCAATGCCCTTCAGGACCTAGTTTTGGAGGCTACAGAGAACCTAAATGATCACTATATTATTGGCAGGGGAGCACATTGTAGTGTGTACAAAGTTATACTTGGTCAACAAGCTTTTGCTTTAAAGAAGTTTGAATTTGGAAGGAACAATAAAATGCAACTAAGTGTCATGTTCAATGAAATTGAAGTCCTTGCAATGTTTAAGCATCAAAATTTGATGAAATACGCACACTACTGGATTGGAGGGGATTATGGTTTAGTCTTATATAAATTCATGGAAAATGGAAGCCTTCATGATATTTTGCATGAGAAGAAACCCCCACCACCCTTTATATGGAGTGACCGGCTTAAGATTGCTGTTGGAATTGCTCAAGGATTAGCGCATCTGCATTATTATTGTATCCCACCCATAGTGCACCTAGACATCAAACCAAATAACATACTTCTTGATGATAATATGGAGCCTATTATAGCTGATTTTAGTACTGCCCTGCTATGTGACATGTCTGAGGATTCTTGTAGTCATTTTGAAACCAGGCAAATGTTTTCATCGCATGTTTTTGGTACCGGAGATTATACTACACCAGAAAATGCAAATGCAGCAATGCACAACAGAAAGTCTGATGTATACAGCTACGGAGTTGTTTTGCTCGAGCTAATAACCAGAAAGAAAGTGTTTGCTCCCTATTTTGATGATGAAACAAAGGAGACCAGTTTAGTGTGCTGGGCAAGATCTATATGGCTGGAAACAGGCAAAATCGAGAAGATTGTCGATTCATACCTTGCCAGTTCATTTCCCAATTCAGTGGAACTAACCAAGCAAGTCACGTCAATGTTTTTATTGGCATTGCAATGCACAGCGACAGATCTGCGAAAGAGACCGACCATGAAAGATGTTATTGACTTGTATAAAAGCGACATGTGTAAGTGGAGGTGTGGTGAGGTGGAAGATGGTGATGCATTTGTAGCCAATACAACACTACAACCATGTAGTACTTGTAATATTTTCTCTGATGTTCCAGTTGTTAGTATTGACGACCATCTCCATGGAAAAGTTACATTTAATGTGGATGCCGAACCTCGAGATAATAGTGACTTTGGATTTTGGCAAGATGCGGATAAATTTCCACTGGGAGTCTATGATTGGGATGATTGGAAACTCATGTCTAGACCTGCAGTTGGTATCCATGGACTTGTAATTCAACTAATGGGAAATTGTGAGACAGAGGTTAAAACAGTGGTGGTAGCTGCTCTAATTGTTCCAAAAATAACCTATTCCCAGCCTTGTTTGATTTACCTTCCCTCTATCACTGGGCCAACACTTACACAACTTTTCAATTGGTTTTTCCTCTCACAGTGGGGTCAATATATGTACCAAAAGAAATCCTTGTATTATCAACCTAAATCATACTTTATACATGCCAATCATATAGACTCCCTTCTTTTTTCTTTTTTTGAGGGAATATAG 4977 0.3842 MTRICCSSRIIKLLLIVSFLHGGFALTTDGLTLLSLLTHWTFVPPLINSSWKASDSIPCSWVGVQCDHTNNVISINLTNHGILGQLGPEIGNFYHLQNLVLLGNGFTGNVPSELSNCSLLEYLDLSKNRFSGKIPYSLKKLQNLKVIGLSSNLLTGEIPDSLFEIHSLEEVSLHSNLLSGPIPTNIGNLTHLLRLYLHRNMFSGTIPSAIGNCSKLEDLNLSFNRLRGEIPVFVWRIQSLLHILVHNNSLSGELPFEMTELKYLRNISLFDNQFSGVIPQSLGINSSIVKLDCMNNKFNGNIPPNLCFGKHLLELNMGINQLQGGIPSDLGRCATLRRLFLNQNNFTGSLPDFASNLNLKYMDISKNNISGPIPSSLGNCTNLTYINLSRNKFARLIPSELGNLLNLVILELSHNNLEGPLPHQLSNCSHMDRFDIGFNFLNGSLPSNLRSWTNITTLILRENYFTGGIPEFLAKFRNLRELQLGGNLLGGKIPRSIVTLRNLFYGLNLSANGLIGGIPVEIQKLKMLQSLDISLNNLTGSIDALGSLVSLIEVNISHNLFNGSVPTGLMKLLNSSPSSFMGNPLICVSCLSCIKTSYVNPCVSKSTDHKGISNVQIVMIEIGSSILISVVLVIIIQRRFLRKESDTEDLKQWYIGRGAGLIGTRYAYEFNVSGEDKPPDLQKLVLQATENLSDQYIIGRGAHGIVYKALLGQQVYAVKKFEFTSNRVKRLRMMCNEIEVLGMYKHRNVIKYADYWIGKDYGLVLYEFMKNGSLHDILHEKKPPPLFTWSDRLKIVVGIAEGLAYLHNDCDTPIVHRDIKPKNILIDDNLEPIIADFGTVLYRKLSEDSYGHSETRKMRSSIVVGTPGYIAPENAYAIVQSRKSDVYSYGVILLEIITRKKVVVPCLNDDTNVTSLVSWARSVWLETGKIEYIADSYLARRFPNSAALTRQVTTMFLLALQCTEKDLRKRPIMKDVIGLFKMHLFKRCDEEEYGDAVAANMLPNIPFVSIDHNLHGESSRAAAQRQREVIFNMETDPMDYYSDFGFWQDTEHEPMDYYSDSSFWHDIDQFLSGFGVEDDWNLKPTICIDGLLVKLMGNGKIIAEKLVKVAALNVPKVTYVWPCLIFLPSGVGPVVTKPFNWFFLSRWGQYMHLQQSLYYQPKSYFLNANKINALQDLVLEATENLNDHYIIGRGAHCSVYKVILGQQAFALKKFEFGRNNKMQLSVMFNEIEVLAMFKHQNLMKYAHYWIGGDYGLVLYKFMENGSLHDILHEKKPPPPFIWSDRLKIAVGIAQGLAHLHYYCIPPIVHLDIKPNNILLDDNMEPIIADFSTALLCDMSEDSCSHFETRQMFSSHVFGTGDYTTPENANAAMHNRKSDVYSYGVVLLELITRKKVFAPYFDDETKETSLVCWARSIWLETGKIEKIVDSYLASSFPNSVELTKQVTSMFLLALQCTATDLRKRPTMKDVIDLYKSDMCKWRCGEVEDGDAFVANTTLQPCSTCNIFSDVPVVSIDDHLHGKVTFNVDAEPRDNSDFGFWQDADKFPLGVYDWDDWKLMSRPAVGIHGLVIQLMGNCETEVKTVVVAALIVPKITYSQPCLIYLPSITGPTLTQLFNWFFLSQWGQYMYQKKSLYYQPKSYFIHANHIDSLLFSFFEGI* 1659
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3024 1658 Gene3D Ribonuclease Inhibitor 179 285 IPR032675 -
Mtr5g3024 1658 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 987 - -
Mtr5g3024 1658 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 1166 1483 - -
Mtr5g3024 1658 Gene3D Transferase(Phosphotransferase) domain 1 769 995 - -
Mtr5g3024 1658 Gene3D Transferase(Phosphotransferase) domain 1 1262 1482 - -
Mtr5g3024 1658 ProSiteProfiles Protein kinase domain profile. 1185 1492 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3024 1658 Gene3D Phosphorylase Kinase; domain 1 1167 1261 - -
Mtr5g3024 1658 Gene3D Phosphorylase Kinase; domain 1 678 768 - -
Mtr5g3024 1658 SMART LRR_typ_2 404 428 IPR003591 -
Mtr5g3024 1658 SMART LRR_typ_2 189 213 IPR003591 -
Mtr5g3024 1658 SMART LRR_typ_2 141 165 IPR003591 -
Mtr5g3024 1658 SMART LRR_typ_2 476 500 IPR003591 -
Mtr5g3024 1658 SMART LRR_typ_2 525 548 IPR003591 -
Mtr5g3024 1658 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Mtr5g3024 1658 SUPERFAMILY L domain-like 286 593 - -
Mtr5g3024 1658 SUPERFAMILY Protein kinase-like (PK-like) 683 978 IPR011009 -
Mtr5g3024 1658 ProSiteProfiles Protein kinase domain profile. 692 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3024 1658 ProSitePatterns Protein kinases ATP-binding region signature. 698 720 IPR017441 GO:0005524
Mtr5g3024 1658 Gene3D Ribonuclease Inhibitor 360 594 IPR032675 -
Mtr5g3024 1658 PANTHER OS08G0446200 PROTEIN 1166 1483 - -
Mtr5g3024 1658 PANTHER OS08G0446200 PROTEIN 4 987 - -
Mtr5g3024 1658 Pfam Protein kinase domain 696 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3024 1658 Pfam Protein kinase domain 1188 1470 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3024 1658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 814 826 IPR008271 GO:0004672|GO:0006468
Mtr5g3024 1658 SMART serkin_6 692 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3024 1658 SMART serkin_6 1185 1472 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3024 1658 Pfam Leucine rich repeat 335 393 IPR001611 GO:0005515
Mtr5g3024 1658 SUPERFAMILY L domain-like 50 305 - -
Mtr5g3024 1658 SUPERFAMILY Protein kinase-like (PK-like) 1175 1471 IPR011009 -
Mtr5g3024 1658 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1307 1319 IPR008271 GO:0004672|GO:0006468
Mtr5g3024 1658 Gene3D Ribonuclease Inhibitor 26 178 IPR032675 -
Mtr5g3024 1658 Gene3D Ribonuclease Inhibitor 286 359 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3024 Mtr-Chr5 39039650 39045564 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3024 84 991 Receptor kinase-like Gene Family AT1G73080 43.941 0.0 706
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr5g3024 Pkinase 7.2e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3024 - - mtr:MTR_5g087360 3344.29