Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3022 ATGACTAGAATTAGTTGTAGCAGTAAAATTATCACAATCTTGTTGTCGATTATTTCCTTCTTCTATGGTGCTACTGCTCTTACCTCTGATGGTTTGACTTTGATGTCACTCTTGACACGTTGGACCTTTGTTCCTCCGCTAATCAACTCTAGTTGGAAGGCTTCTGATTCCGATCCATGCTCATGGGTTGGTGTTCAATGTGACCATACTTATAATGTCATTTCCCTTAGCCTCACTGGTCATGGGATTATTGGTCAACTTGGACCAGAAATTGGTAACCTTTATCACTTGCAGAACCTTTTGTTGTTCGGTAATGGTTTCTCAGGAAACGTGCCTTCAGAGTTAAGCAACTGTAGCTTGCTTCAGAATTTAGATCTTTCTGAGAACAGATTCAGTGGAAGTATATCATATAGTTTGATAAAGTTGCAAAATTTAAAGTTTTTAAGATTGTCTTCCAATCTTCTGACTGGTAAAATTCCAGATTCTTTATTTGAAATTCAATCCCTTGAAGAAGTGAGCCTGCACAATAACCTTCTTAGCGGCAATATCCCAACCAATATTGGAAACATGACTAATCTATTAAGGTTGTATCTACATAGTAATATGTTTTCAGGGACCATTCCTTCATCTCTTGGCAATTGCAGTAAACTTGAAGACCTTGATTTGTCTTTCAACCGTTTGAGAGGTGAAATTCCGGTCAGTATTTGGAGAATTCAAAGTCTTGTGCACATCTTGGTTCACAACAACGATCTCTTTGGGGAACTACCTTTGGAAATCACAAACCTTAAGTGTCTAAAAAATGTCTCATTGTTTGAAAATCAGTTCTCAGGAGTCATACCTCAAAGCTTGGGAATCAACAGCAGCATAGTGAAGTTGGACTGTATGAATAACAAGTTCAGTGGTAATATCCCACCAAATCTTTGTTTTGGAAAGCATTTGTTAGAGCTCAACATGGGAATCAATCAACTACAAGGTGGCATACCTTCTGATCTAGGAAGATGTGCAACTCTAAGGAGGTTGTTTCTCAATCAAAATAATTTCACCGGGTTGCTTCCCGATTTTGCAAGTAATCTTAACCTGAAATACATGGACATAAGCAAAAACAATATTGGTGGACCAATTACATCAAGTTTGGGAAATTGCACAAATCTCGCATACATTAATTTGTCAAGAAACAAATTTGCAGGACTCATACCATTACAGCTTGGAAACCTTGTGAATCTTGTGATTTTGGATCTTGCTCACAATAATTTGGAAGGTCCTTTGCCACTTAGGCTTTCAAACTGTGCTAAAATGGATCGTTTTGATGTGGGATTCAATTTCTTAAATGGATCACTCCCATCAAGTTTGAGAAGTTGGGCACGCATAACTACATTGATTTTCAGAGAAAATTACTTCACTGGAGGTATCCCAGGGTTTTTGACAGAATTTAGCAACCTTCGTGAGTTACAACTAGGTGGAAATTTGCTTGGAGGCGAAATTCCTCGATGGTTGGGGACATTGCATAATCTGTTCTATGGATTGAATCTGAGTTCTAATGGATTAACAGGCAGCATTCCTTCAGAAATTGGGAAGCTAGGACTGCTGCAAAGTCTGGATATATCCTTGAACAATTTAACAGGAAGCATATATGCTCTTGAAAGTCTTGTTTCGTTAACTGATATCAATGTTTCTTACAATCTCTTCAATGGTTCTGTACCAACAGGTCTAATGAAGTTACTGAATTCCTCACCATCATCATTCATGGGTAGTCCTCTCCTATGTGTTAGTTGTTTGAGTTGCATTGAAACTAGTTATGTAAATCCATGTGTCTACAAGTCAACTGATCACAAAGGTATCGGTAATGTTCAAATTGTGTTGATAGAACTTGGATCCTCAATATTTATTTCTGCTCTGATGCTAATAATGATTCGAATGTATCTCCTTAAAAGATATAAGCAGGAATTCAAGATGTCTTGTTCCCCACTGGTCATGGTGTTGAAGGCTCTGGCTAAACTATATGATTGCTATAATTTTGGCAAAGGAATTGTGTGTAAAACCCAAATGACATCTGATCTTAAGCAGCAGTCGTATAGTGAAAGACAACCTGCTCCGGCGTCTGATCTTAATCTAAAGCCTGATATTGAAAGAGGAGCTGCTCCGGCATCCGATTTTAACAAATGGTCTTATTATATTGAAAAAGGGGTTGGAAGGATTGGAGTCACATATGCTCGCGAGTTCAATATCTCATGCAAAGAGAAGCCACTTACTCTTAAAGATGCAGTGTTGCAGGCTACTGAGAACCTAAATCAATGTTATATCATTGGCAAGGGAGGACATGGTACTGTGTACAAAGCCATAATTGGTCAGCATGTTTTTGCTGTAAAGAAGGTCGAATTTGGGTGGAACAAGAAAAAGCGGCTAAGTATCATACGCAACGAAATTGAAGTCCTTGGGATGTTTAAGCATCGAAATTTGATCAAACACGCAGACTACTGGATTGGAGAGGAATATGGTTTAGTCTTATATGAATTCATGGAAAATGGAAGCCTTCATGATATTTTGCATGAAAAGAAACCCCCACCACGATTAACGTGGAATGTTCGGTGTAAAATAGCAGTCGGAATTGCTCAAGGACTAGCATATCTGCATTATGATTGTGTTCCAAGAATAGTGCACCGAGACATCAAACCAAAGAACATTCTCGTTGACGACAATATGGAGCCTATTATAGCTGATTTTGGCACTGCCCTATGCAAGCAGATATCTGAGGATTCTAATAGTCATTCTACAACTAGGAAAATGCTTTCATCGCATGTTGTTGGTACTCCTGGATATATTGCACCGGAGAATGCATATGTTAATGTTCCAGGAAGAAAGTCTGATGTATATAGCTACGGAGTTGTTTTGCTTGAGCTAATAACCAGAAAGAAATTGTTAGTTCCCTCTTTAAACGATGAAGCAGAGGAGACCCCCTTAGTGATCTGGGCTAGATCTGTATGGCTGAAAACAGGCAAAACTGAGAAGATTGTTGATCATTACCTTGCAAGTGAATTTCCCAATTCATCAGCACTAGCCAAGCAAGTCTCTGCAGTCCTTTCATTGGCATTACGATGCATAGAGAAGGATCCACGAGATAGGCCGACCATGAAAGGTGTTATTCGTTTTTTTAATAACAACTTGTTTAAGCTGAGGTGTGATGAGGTTCAATATGGCGATGGACTTACAATTAAACTGATGGGAAACGGTAAGATTGAGTCTGTAAAATTGGTCAGGGTAGCTGCTCTAATTCTTCCAAAAATAACTTATGCTTGGCGTCATTTGACCTTCATTCCCTCTATCAATGGTCCAATACTTACCAAACCTTTCAACTGGTTTTTCCTATCGCGTTGGGGTCAATATAGACACCTGCAGAAATCCCTGGACCCACAGACCAAATCATACTACTATATAAACACCAATCAAAATGAGGACACTGTGCAACTTAGTGAATAG 3474 0.3883 MTRISCSSKIITILLSIISFFYGATALTSDGLTLMSLLTRWTFVPPLINSSWKASDSDPCSWVGVQCDHTYNVISLSLTGHGIIGQLGPEIGNLYHLQNLLLFGNGFSGNVPSELSNCSLLQNLDLSENRFSGSISYSLIKLQNLKFLRLSSNLLTGKIPDSLFEIQSLEEVSLHNNLLSGNIPTNIGNMTNLLRLYLHSNMFSGTIPSSLGNCSKLEDLDLSFNRLRGEIPVSIWRIQSLVHILVHNNDLFGELPLEITNLKCLKNVSLFENQFSGVIPQSLGINSSIVKLDCMNNKFSGNIPPNLCFGKHLLELNMGINQLQGGIPSDLGRCATLRRLFLNQNNFTGLLPDFASNLNLKYMDISKNNIGGPITSSLGNCTNLAYINLSRNKFAGLIPLQLGNLVNLVILDLAHNNLEGPLPLRLSNCAKMDRFDVGFNFLNGSLPSSLRSWARITTLIFRENYFTGGIPGFLTEFSNLRELQLGGNLLGGEIPRWLGTLHNLFYGLNLSSNGLTGSIPSEIGKLGLLQSLDISLNNLTGSIYALESLVSLTDINVSYNLFNGSVPTGLMKLLNSSPSSFMGSPLLCVSCLSCIETSYVNPCVYKSTDHKGIGNVQIVLIELGSSIFISALMLIMIRMYLLKRYKQEFKMSCSPLVMVLKALAKLYDCYNFGKGIVCKTQMTSDLKQQSYSERQPAPASDLNLKPDIERGAAPASDFNKWSYYIEKGVGRIGVTYAREFNISCKEKPLTLKDAVLQATENLNQCYIIGKGGHGTVYKAIIGQHVFAVKKVEFGWNKKKRLSIIRNEIEVLGMFKHRNLIKHADYWIGEEYGLVLYEFMENGSLHDILHEKKPPPRLTWNVRCKIAVGIAQGLAYLHYDCVPRIVHRDIKPKNILVDDNMEPIIADFGTALCKQISEDSNSHSTTRKMLSSHVVGTPGYIAPENAYVNVPGRKSDVYSYGVVLLELITRKKLLVPSLNDEAEETPLVIWARSVWLKTGKTEKIVDHYLASEFPNSSALAKQVSAVLSLALRCIEKDPRDRPTMKGVIRFFNNNLFKLRCDEVQYGDGLTIKLMGNGKIESVKLVRVAALILPKITYAWRHLTFIPSINGPILTKPFNWFFLSRWGQYRHLQKSLDPQTKSYYYINTNQNEDTVQLSE* 1158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3022 1157 ProSiteProfiles Protein kinase domain profile. 762 1055 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3022 1157 Pfam Protein kinase domain 767 1046 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3022 1157 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 4 1060 - -
Mtr5g3022 1157 SUPERFAMILY Protein kinase-like (PK-like) 751 1048 IPR011009 -
Mtr5g3022 1157 SMART serkin_6 762 1050 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3022 1157 Gene3D Transferase(Phosphotransferase) domain 1 839 1061 - -
Mtr5g3022 1157 Pfam Leucine rich repeat N-terminal domain 29 68 IPR013210 -
Mtr5g3022 1157 ProSitePatterns Protein kinases ATP-binding region signature. 768 790 IPR017441 GO:0005524
Mtr5g3022 1157 Gene3D Phosphorylase Kinase; domain 1 743 838 - -
Mtr5g3022 1157 Gene3D Ribonuclease Inhibitor 28 176 IPR032675 -
Mtr5g3022 1157 PANTHER OS08G0446200 PROTEIN 4 1060 - -
Mtr5g3022 1157 SUPERFAMILY RNI-like 75 395 - -
Mtr5g3022 1157 Gene3D Ribonuclease Inhibitor 358 451 IPR032675 -
Mtr5g3022 1157 Gene3D Ribonuclease Inhibitor 177 286 IPR032675 -
Mtr5g3022 1157 Gene3D Ribonuclease Inhibitor 452 595 IPR032675 -
Mtr5g3022 1157 Gene3D Ribonuclease Inhibitor 287 357 IPR032675 -
Mtr5g3022 1157 ProSitePatterns Serine/Threonine protein kinases active-site signature. 884 896 IPR008271 GO:0004672|GO:0006468
Mtr5g3022 1157 SMART LRR_typ_2 190 214 IPR003591 -
Mtr5g3022 1157 SMART LRR_typ_2 142 166 IPR003591 -
Mtr5g3022 1157 SMART LRR_typ_2 405 429 IPR003591 -
Mtr5g3022 1157 SMART LRR_typ_2 477 501 IPR003591 -
Mtr5g3022 1157 SUPERFAMILY L domain-like 312 568 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3022 Mtr-Chr5 39028348 39032371 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3022 11 1048 Receptor kinase-like Gene Family AT1G17750 33.962 4.65e-161 506
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Mtr5g3022 Pkinase 7.9e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3022 - - mtr:MTR_5g087340 2301.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Mtr3g1304 3 24000392 24006202 Mtr5g3022 5 39028348 39032371 PCT