Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3020 ATGAAACGCATACTGGGTGAAGATGCTTCACAGTTCAACAACTTTCAGATTTTAAACCATCGTTACGTCTTCCTAAACCTTCTTGGAAAGGGGGGCTATAGCGAGGTGTACAAGGCTTTTGACTTGGTGGAGCATAGATATGTTGCATGCAAGCTTCATGGTGTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATAAGGCATGCAATTCGGGAGTATAATATTCACAAGACCTTGGTTCATCGTCATATTGTTCGTTTATGGGACATCTTTAAGATTGATCCAAATACATTCTGCACTGTTCTGGAGTTTTGTAGTGGTAAAGATCTTGATGATGTTCTTAAGGAAACACCTATTTTGCCCGAGAACGAGGCTAAAGTCGTTTTATTTCAGATTATCAAAGCCCTTGTTTACATGAATGAAAGAATGCCGAAGGTTATCCATTATGATTTAAAGCCCGGAAATGTTTTGTTTGATGAGCTTGGTATTGCCAAAGTGACTGATTTTGGTCTTAGCAAGATAGTGGAGAATGACGTGGGATCCCAGGGTATGGAACTTACATCCCAGGGTGCTGGAACATATTGGTATTTGCCTCCTGAATGCTTTGAGCAGAGCAAGACACCTCGCATATCATCCAAGGTTGATGTCTGGTCTGCTGGTATTTGTTTTTATTACATGCTCTTTGGCAGACGTCCTTTCGGGCATGACCAAACACAACAGAAAATATTTCTTGAGCACACAATTATTAATGCACATGAAGTAGAATTTCCCTCTGGATCTACTGTTTCTAATAAGGCTAAGGATTTTATTCGGCGGTGTCTTACATATGACCAGGCGGAGAGACCAGATGTATTAACAATTGCTCAAGACTCATATCTCACTTTTACTCAGGAATAG 903 0.4031 MKRILGEDASQFNNFQILNHRYVFLNLLGKGGYSEVYKAFDLVEHRYVACKLHGVNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFKIDPNTFCTVLEFCSGKDLDDVLKETPILPENEAKVVLFQIIKALVYMNERMPKVIHYDLKPGNVLFDELGIAKVTDFGLSKIVENDVGSQGMELTSQGAGTYWYLPPECFEQSKTPRISSKVDVWSAGICFYYMLFGRRPFGHDQTQQKIFLEHTIINAHEVEFPSGSTVSNKAKDFIRRCLTYDQAERPDVLTIAQDSYLTFTQE* 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3020 300 PANTHER TOUSLED-LIKE KINASE, ISOFORM G 1 298 - -
Mtr5g3020 300 ProSiteProfiles Protein kinase domain profile. 22 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3020 300 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Mtr5g3020 300 Gene3D Transferase(Phosphotransferase) domain 1 13 300 - -
Mtr5g3020 300 ProSitePatterns Protein kinases ATP-binding region signature. 28 51 IPR017441 GO:0005524
Mtr5g3020 300 SMART serkin_6 22 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3020 300 PANTHER MIXED LINEAGE PROTEIN KINASE 1 298 - -
Mtr5g3020 300 CDD STKc_TLK 21 294 - -
Mtr5g3020 300 Pfam Protein kinase domain 22 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3020 300 SUPERFAMILY Protein kinase-like (PK-like) 14 296 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3020 Mtr-Chr5 38993016 38995945 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3020 9 289 MAP Kinase Kinase Kinase AT3G13530 28.169 1.51e-27 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Mtr5g3020 Pkinase 2.6e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3020 K08864 - gmx:100805168 525.398