Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3019 ATGCTTGAGCCTTGCAGTTCAAGTGATTCTGATGATGATATTGGTGGGGAATTCTTGATTCAAGCCAACACACATAAGCGCCAAAAAATTCAAGAAGATGATAATGCTGATGGTATCGAAAGTGCCGAGGTTGTTCCTGAAGGAAGACAAGCTAGTTTGGAAATTGGGGAGATAAAAAATAATGTTGATGCAAATAGAAACAAATCTGGTCGTGGAAGAGGAAGTTCTGGTTCAGGTAGCAGACGTGGTTCCAAATCTAATGATCAGACCAGAACACAAATTTCTTCTGCAACAGTTTCAGCTTCAAATGGTCAGAATGAGAATGTATGTCATAAAGATGGTAGACTCAAAGATCAGTTTCATAATGATAATAGTGCTTCATTAGAGGAGGAGAATGCATCTTTACGCACAAAAATTGTTGCGTTGGAGGAAGACTTGCGTAAAGCAAAGCAAGAAACCTCTGAGCTTCAGAATCTTTGTCCACGTTTAGAAAAGGAACTGAAAGATCGTGAGGAGCAAATGAAACCTAAGAGAACAAAAATAATATCTGATTTGCTGATATCAGTTTCAAAGGCTGAGAGACGAGAATCAAGGCTAAAAGTACGTCAGGACTCTTTGAGACTCGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCTTATCTGAGACCTGGGAAGATGGTCAGGCGTTAAAGGATCTGAATGCCCAGCTTAAACAACTGCTAGAAACAAGAGAGGCTATTGATCGACAACGCAAGTTATTAAAGAAAAAACAATCTGATAAGGGACGTGATGTGATAGATGCAGAGGCTGGATTGCAGGAAGATATTCTCATTCATGAGGAAATCTATAAGTCTCGACTAGCCAGCATTAAACGGGAAGAAGAAATTGCTCTGCGAGAGAGGGACCGCTACGAACTAGAGAAAGGAAGTCTAATCCGTGAAATGAAACGCATACGGGATGAAGATGGTTCACGGTTTAACAATTTTCAGATTCTAAACAATCGTTATGCCCTTTTAAACCTTCTCGGAAAGGGAGGATTCGGCGAGGTGTACAAGGCTTTTGACTTACTGGATCATGGATATGTCGCCTGCAAGCTTCATGGTTTAAATGCTCAATGGGCTGAAGAGAAGAAGCTAAGTTACATGAGGCATGCAATTCGAGAGTGTCATATTCACAAGACCTTGGTCCATCGCCACATTGTTCGTTTATGGGACATCTTTCAAATTGATCCGGATACATTCTGCACTGTTCTAGAATATTGTAGTGGAAAAGATCTTGATGCTGTTCTTAAAGCAACACCTATATTGCTCGAGAGGGAGGCTAGAGTCATTTTAGTTCAGATTTTCCAAGGCCTTATTTACATGAATAAAGGAGCACTCAAGATTATCCATTATGATTTGAAGCCTGGAAATGTTTTGTTTGATGAACTTGGTATTGCCAAAGTGACTGATTTTGGTCTTAGCAAGATAGTAGAGAATGATGTGGGATCCCAGGGTATGGAACTTACATCCCAGGGGGCTGGAACGTATTGGTATTTGCCTCCGGAATGCTTTGAGCTCAGCAAGACACCTCTCATATCATCCAAGGTTGATGTCTGGTCTGCTGGTATTTTGTTTTATCAAATGCTCTTTGGTAGACGTCCTTTCGGACATGACCAATCACAAGAGAGAATACTTGGTGAAAAAACGATTATCAAGGCACACAAGGTTGAATTTCCCTCTAGACCTACTGTTTCTAATGAGGCAAAGGATTTTATTCGGCGGTGTCTTACATACAACCAGGCTGAGAGACCAGATGTATTAACCATTGCCCAAGATTCGTATCTTGCTTACTCAAAGAAATAG 1845 0.4081 MLEPCSSSDSDDDIGGEFLIQANTHKRQKIQEDDNADGIESAEVVPEGRQASLEIGEIKNNVDANRNKSGRGRGSSGSGSRRGSKSNDQTRTQISSATVSASNGQNENVCHKDGRLKDQFHNDNSASLEEENASLRTKIVALEEDLRKAKQETSELQNLCPRLEKELKDREEQMKPKRTKIISDLLISVSKAERRESRLKVRQDSLRLGNVGVIRAGTVLSETWEDGQALKDLNAQLKQLLETREAIDRQRKLLKKKQSDKGRDVIDAEAGLQEDILIHEEIYKSRLASIKREEEIALRERDRYELEKGSLIREMKRIRDEDGSRFNNFQILNNRYALLNLLGKGGFGEVYKAFDLLDHGYVACKLHGLNAQWAEEKKLSYMRHAIRECHIHKTLVHRHIVRLWDIFQIDPDTFCTVLEYCSGKDLDAVLKATPILLEREARVILVQIFQGLIYMNKGALKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVENDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSAGILFYQMLFGRRPFGHDQSQERILGEKTIIKAHKVEFPSRPTVSNEAKDFIRRCLTYNQAERPDVLTIAQDSYLAYSKK* 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3019 614 PANTHER MIXED LINEAGE PROTEIN KINASE 7 614 - -
Mtr5g3019 614 Coils Coil 230 257 - -
Mtr5g3019 614 SUPERFAMILY Protein kinase-like (PK-like) 328 609 IPR011009 -
Mtr5g3019 614 MobiDBLite consensus disorder prediction 62 109 - -
Mtr5g3019 614 MobiDBLite consensus disorder prediction 1 111 - -
Mtr5g3019 614 SMART serkin_6 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3019 614 ProSiteProfiles Protein kinase domain profile. 336 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3019 614 Coils Coil 287 321 - -
Mtr5g3019 614 CDD STKc_TLK 335 608 - -
Mtr5g3019 614 Coils Coil 125 173 - -
Mtr5g3019 614 ProSitePatterns Protein kinases ATP-binding region signature. 342 365 IPR017441 GO:0005524
Mtr5g3019 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 462 474 IPR008271 GO:0004672|GO:0006468
Mtr5g3019 614 Gene3D Transferase(Phosphotransferase) domain 1 327 614 - -
Mtr5g3019 614 PANTHER BNAC09G36930D PROTEIN 7 614 - -
Mtr5g3019 614 Pfam Protein kinase domain 337 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3019 Mtr-Chr5 38982379 38988819 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3019 319 614 MAP Kinase Kinase Kinase AT3G13530 26.087 1.58e-25 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Mtr5g3019 Pkinase 5.3e-58 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3019 K08864 - gmx:100805168 986.482