Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Mtr5g3014 ATGAATTGTAAATACGTATTAAAGGAACTAAAGGAATTGAAAGATCTTGAGGAGCAAATGAAACCTAAGAGAACAAAAATAATATCCGATTTGCTGATATCAGTTTCAAAGACTGAGAGACAAGAAGCAAGACTAAAAGTACGACAGGACTCATTGAGACTCGGAAATGTTGGTGTAATCAGAGCTGGAACTGTCTTATCTGAGACCTGGGAAGATGGTCAGGCGTTAAAGGATCTGAATGCCCAGCTTAAACAACTACTCGAAACAAAGGAGGCAATTGAGCGCCAGCGCAAGTTATTCAAGAAAAAACAATCTGATAAGGGTGATGGAATAGATGCAGAGGCTGGATTGCTGGAAGATATTCTCATTCACGAGGAAATCTATAAGTCTCGACTAGCCAGCATTAAACGGGAAGAAGAACTTGTTTTGCGAGAGAGGGACTGCTACGAACTAGAGAAGGGAAGACTAATTCGTGAAATGAAACGCATTCGGGATGATGATGGTTCACGGTTCAACAATTTTCAGATTCTAAACCATCGTTACGCCCTTCTAAACCTTCTTGGAAAGGGAGGATTCAGCGAGGTGTACAAGGCTTTTGATTTGGTGGAGCATAGATATGTTGCATGCAAGCTTCATGGTTTAAATGCTCAATGGAGTGAAGAGAAGAAGCAAAGTTACATAAGGCATGCAATTCGGGAGTATAATATTCACAAGACCTTGGTCCATCGTCATATTGTTCGTTTATGGGACATCTTTGAGATTGATCCAAATACATTCTGCACTGTTCTAGAGTATTGCAGCGGGAAAGATCTTGATGCTGTTCTTAAAGCAACACCTATATTGCCTGAGAAGGAGGCTAGAGTCATTTTAGTTCAGATTTTCCAAGGCCTTATTTACATGAATAAAAGAGCACTGAAGATTATCCATTATGATTTAAAGCCTGGAAATGTTTTGTTTGATGAGCTTGGTATTGCCAAAGTGACTGATTTTGGTCTTAGCAAGATTGTGGAGAATGACGTGGGATCCCAGGGTATGGAACTTACATCCCAGGGGGCTGGAACGTATTGGTATTTGCCTCCTGAATGCTTTGAGCTCAGCAAGACGCCTCTTATATCATCCAAGGTTGATGTCTGGTCTAGTGGTATTTTGTTTTATCAAATGCTATTCGGCAGACGTCCTTTCGGACATGACCAAACACAAGAGAGAATACTTCGTGAAGACACAATTATTAAGGCACGCAAGGTTGAATTTCCCTCAAGACCTACTGTTTCTAATGAGGCAAAGGAATTTATACGGCGGTGTCTGACATATAACCAGGCTGAGAGACCAGATGTATTGACCATTGCTCAAGATCCATATCTCACATACGTGAAGAAGTAG 1380 0.4094 MNCKYVLKELKELKDLEEQMKPKRTKIISDLLISVSKTERQEARLKVRQDSLRLGNVGVIRAGTVLSETWEDGQALKDLNAQLKQLLETKEAIERQRKLFKKKQSDKGDGIDAEAGLLEDILIHEEIYKSRLASIKREEELVLRERDCYELEKGRLIREMKRIRDDDGSRFNNFQILNHRYALLNLLGKGGFSEVYKAFDLVEHRYVACKLHGLNAQWSEEKKQSYIRHAIREYNIHKTLVHRHIVRLWDIFEIDPNTFCTVLEYCSGKDLDAVLKATPILPEKEARVILVQIFQGLIYMNKRALKIIHYDLKPGNVLFDELGIAKVTDFGLSKIVENDVGSQGMELTSQGAGTYWYLPPECFELSKTPLISSKVDVWSSGILFYQMLFGRRPFGHDQTQERILREDTIIKARKVEFPSRPTVSNEAKEFIRRCLTYNQAERPDVLTIAQDPYLTYVKK* 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Mtr5g3014 459 Coils Coil 76 103 - -
Mtr5g3014 459 CDD STKc_TLK 180 453 - -
Mtr5g3014 459 SMART serkin_6 181 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3014 459 PANTHER MIXED LINEAGE PROTEIN KINASE 8 459 - -
Mtr5g3014 459 ProSitePatterns Serine/Threonine protein kinases active-site signature. 307 319 IPR008271 GO:0004672|GO:0006468
Mtr5g3014 459 ProSiteProfiles Protein kinase domain profile. 181 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
Mtr5g3014 459 SUPERFAMILY Protein kinase-like (PK-like) 173 455 IPR011009 -
Mtr5g3014 459 Gene3D Transferase(Phosphotransferase) domain 1 172 459 - -
Mtr5g3014 459 PANTHER BNAC09G36930D PROTEIN 8 459 - -
Mtr5g3014 459 ProSitePatterns Protein kinases ATP-binding region signature. 187 210 IPR017441 GO:0005524
Mtr5g3014 459 Pfam Protein kinase domain 182 454 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Mtr5g3014 Mtr-Chr5 38887317 38891939 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Mtr5g3014 169 454 MAP Kinase Kinase Kinase AT3G13530 26.644 6.80e-27 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TLK Mtr5g3014 Pkinase 5e-59 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Mtr5g3014 K08864 - gmx:100789927 842.802